Gene Information

Name : Amir_2972 (Amir_2972)
Accession : YP_003100738.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1082
EC number : -
Position : 3438326 - 3439063 bp
Length : 738 bp
Strand : +
Note : PFAM: xylose isomerase; KEGG: lch:Lcho_4327 xylose isomerase domain- containing protein

DNA sequence :
ATGAGCACGCTTTCCGTCCAGCTCTACTCGGTGCGCGACGCCTTCGCCGAAGACCCGTCGGCCACCCTCGCCAAGCTCGC
CGAGATCGGCTTCACCAACGTGGAGCCCTTCAAGCTGGTGGAGAACGCCTCCGCCCTGCGCGCCCTGCGCGAGCACGGGC
TGTCCGCCCCGACCACGCACGTCAGCCTCGTCGGCGCCGAGCTGAACCCGGTCTTCGACGCCGCCGCCGAGCTGGGCGTC
ACCACCCTCATCGACCCGTTCATCGCCGACGAGAAGTGGCGCGACGCGGGCGACATCGCCGCCACCGCCGACGCCCTCAA
CGCCGCCGCCGAGGCCGCCAAGGGCCACGGCCTCACCGTCGGCTACCACAACCACTGGTGGGAGCTGGCCAACCGCGTCG
ACGGCCGCGCCGCGCTGGAGGTCCTGACCGACCACCTGACCCCCGACGTGGTCCTGGAGGTCGACACCTACTGGGCCGCC
GCCGGTGGCGAGGACGCCCCGGCCCTGCTGCGCCGCCTCGGCGAGCGCGTCGTCGCCCTGCACGTCAAGGACGGCGGCCT
GGCCACCGACGCCACCGGCCAGGTCCCCGCCGGTCAGGGCAGCGTGCCCGTGGCCGACGTGCTCGCCTCCGCCCCGAACG
CCCTGCGCGTGGTCGAGTTCGACGCCTACAGCGGCGACCTGTTCGAGGGCATCGCCGCCAGCCGCGCGTTCCTGCTCACC
CTGGAGGACGCCAAGTGA

Protein sequence :
MSTLSVQLYSVRDAFAEDPSATLAKLAEIGFTNVEPFKLVENASALRALREHGLSAPTTHVSLVGAELNPVFDAAAELGV
TTLIDPFIADEKWRDAGDIAATADALNAAAEAAKGHGLTVGYHNHWWELANRVDGRAALEVLTDHLTPDVVLEVDTYWAA
AGGEDAPALLRRLGERVVALHVKDGGLATDATGQVPAGQGSVPVADVLASAPNALRVVEFDAYSGDLFEGIAASRAFLLT
LEDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CMM_0111 YP_001220850.1 putative sugar phosphate isomerase/epimerase Not tested chp/tomA region Protein 1e-41 44
CMM_0034 YP_001220773.1 putative sugar phosphate isomerase/epimerase Not tested chp/tomA region Protein 1e-42 44