|
Name : Amir_2773 (Amir_2773) Accession : YP_003100552.1 Strain : Actinosynnema mirum DSM 43827 Genome accession: NC_013093 Putative virulence/resistance : Unknown Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 3199384 - 3199962 bp Length : 579 bp Strand : - Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bid:Bind_3241 ECF subfamily RNA polymerase sigma-24 factor DNA sequence : GTGACTACGATCCGGGTCGTGACGACTCCGACCCCCGACGACGAGGTGACGCGCTGGGCGCTGCGGGCGCGCTCCGGTGA CCGGAACGCCCTGGAGCAGTTCGTGCGCGGCACCCAGCGCGACGTGTGGCGGTTCACCGCGCACCTCGCCGGGGTCGACG TGGCCGACGACCTGTCGCAGGAGACCTACGCCCGCGCGCTGACGAGCCTGCACCGGTTCGCCGGGCGGTCGTCGGCGCGC ACGTGGCTGCTGGTGATCGCGCGGCGGGTCGTGGTGGACCAGGTGCGGATGGCGCAGTCCCGGCCGCGCCTGTCGCCGGG GGCGGACTGGGTGCGCGAGGCGGACCGCAGGCCCGCGGCGACCGGGTTCGAGGACGCGGTCGAGCTGAACCTGCTGCTGG ACTCGCTGGACCAGGACCGGCGCGAGGCGCTGGTGCTGACGCAGGTGCTGGGGCTGTCGTACGCGGAGGCGGCGGACGTG GCGGGGTGCCCGGTGGGCACGATCCGGTCGCGGGTGGCGCGGGCGCGCGACGACCTGATGCGGGCGGTCGACGTGGGCGA GGCCAGCGAGGTCGGCTGA Protein sequence : MTTIRVVTTPTPDDEVTRWALRARSGDRNALEQFVRGTQRDVWRFTAHLAGVDVADDLSQETYARALTSLHRFAGRSSAR TWLLVIARRVVVDQVRMAQSRPRLSPGADWVREADRRPAATGFEDAVELNLLLDSLDQDRREALVLTQVLGLSYAEAADV AGCPVGTIRSRVARARDDLMRAVDVGEASEVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 3e-32 | 55 |
