Gene Information

Name : Amir_2759 (Amir_2759)
Accession : YP_003100538.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3178855 - 3179625 bp
Length : 771 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pla:Plav_1100 ABC transporter

DNA sequence : 
GTGCCCAGAACCACCTCACCGGACCGCCCCGCAGCCCCGACCGGGACCGCCGCGCTCGCCCTGACCGCACTGACCAAGGT
GCACGGCTCGGGGGAGAGCGCCGTCACCGCGCTGGACGGCGTCTCGCTCACCTTGGAGCGCGGCACGTTCACCGCCGTCA
TGGGCCCCTCGGGCTCGGGCAAGAGCACCTTCCTCAACTGCGCCGCAGGGCTGGAGCGCCCCACCTCGGGCACCGTGGTG
CTCGGCGGCGCCGACCTGTCCGGCCTGGACGAGAACCGCCTGACCGCGCTGCGCCGCGACCGCGTCGGCTTCGTCTTCCA
GGGCTACAACCTGGTGCCGTCGCTGGACGTGCTGCGCAACGTCGAGCTGCCCCTGCTGCTCGGCGCGGGCCGCGCCGACC
CGGCGTGGCGCGACGAGGTGGTGCGCAGGGTCGGCCTGACCGACCGCCTCGGCCACATGCCGTCCCAGCTCTCCGGCGGC
CAGCAGCAGCGCGTGGCCATCGCCAGGGCCCTGGTCACCCGGCCCGACGTGGTGTTCGCCGACGAGCCGACCGGCGCGCT
GGACAGCCGCACCGGCAAGCGGGTGCTGGCGCTGCTGCGCGACGTCGTCGACGCCACCGGCCAGACCGTCCTCATGGTCA
CCCACGACCCGGCGGCGGCCTCCGTCGCCGACCGCGTGGTGTTCCTGCGCGACGGCCGCCTGGTCGACGAGCTGGTCGCG
CCGACCGCCGAGCACGTCGCCGAGCGCATGACGGCCCTGGGGGAGTGGTGA

Protein sequence : 
MPRTTSPDRPAAPTGTAALALTALTKVHGSGESAVTALDGVSLTLERGTFTAVMGPSGSGKSTFLNCAAGLERPTSGTVV
LGGADLSGLDENRLTALRRDRVGFVFQGYNLVPSLDVLRNVELPLLLGAGRADPAWRDEVVRRVGLTDRLGHMPSQLSGG
QQQRVAIARALVTRPDVVFADEPTGALDSRTGKRVLALLRDVVDATGQTVLMVTHDPAAASVADRVVFLRDGRLVDELVA
PTAEHVAERMTALGEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-38 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-26 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_2759 YP_003100538.1 ABC transporter NC_008702.1.4606598. Protein 2e-36 48
Amir_2759 YP_003100538.1 ABC transporter CP001581.1.gene598.p Protein 2e-47 47
Amir_2759 YP_003100538.1 ABC transporter CP001581.1.gene798.p Protein 1e-44 46
Amir_2759 YP_003100538.1 ABC transporter NC_012469.1.7686878. Protein 4e-45 46
Amir_2759 YP_003100538.1 ABC transporter NC_012469.1.7685735. Protein 1e-34 41