Gene Information

Name : Amir_2722 (Amir_2722)
Accession : YP_003100503.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 3132948 - 3133946 bp
Length : 999 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: cvi:CV_2236 iron-enterobactin transporter membrane protein

DNA sequence :
GTGAGCCGAGCGACGCGGGCGGCGGCCGGGGCGCGGGTCGCGCTCCTGGCCGCCGCCGTCGTGCTGCTGGGCGTGGCCGC
CGTGGTGAGCCTGGGGGTGGGGGCGCGCGCGATCGCCCCCGGTGACGTGGTGCGGGTGCTGCTGTCCCCGGACGGCTCGC
CCGACGCGATGATCGTGTGGGACGTGCGGGCCCCGCGCGCGGTGCTGGCGGTGGCCGCCGGTGCGGCGCTGGCCGTGGCG
GGCGCGCTGGTGCAGGCGCTGTCGCGCAACCCGCTGGCCGAACCCGGTGTGCTGGGCGTGACGGCGGGGGCCGGGTTCGC
GATCACGGTCGGTTCGGCGCTGGGGGTCGCGGGCGCGGCCGGTGAGCTGCTGCTGTCGGTGCTGGGGGCCGTGCTGGCCG
CGCTGCTGGTGTACGCGGTCGGCCGGACCTCGCCGCTGCGGCTGGTGCTGACCGGGGTGGCGCTGACCTCCGTGCTGTCC
GGCGTGGGCCTGGGGCTGCGGCTGCTGGTGCCGGACGTGTTCGACCGGTACCGGTTCTGGGCGGTCGGGTCGCTGGCCGG
GCGCGAGCAGGCGCCGACGACCGTGCCGCTGCTGGCGATCGCGCTGGCACTGGTCGGCGCGCTGGTGCTGAGCAGGCAGC
TCGACGCGGTGGCGCTGGGCGAGGGCGTGGCGCGGGCGCTGGGGGCGAACGTGGCGCGGGTGCGGGTGGGGGCGCTGGTG
CTGGTGACCGCGCTGGCCGGTGCGGCGACGGCGGTGGCCGGGCCGATCCTGTTCGTGGGGCTGATCGTGCCGCACCTGGC
GCGGCGCGCGGCCGGGGCGTCGGTGCCGTGGCTGGTCGGGTACGCGCTGGTGCTCGGTCCGGTGCTGCTGCTGCTGGCGG
ACACCGCTTCCCGCGTGCTGCTGCCGACCGGCGAGGTGCCGGTGGCGATCGTGACCGCGTTCCTGGGCGGGCCGGTGCTG
GCCTGGGCGGTCCGCAAGTACGGGGCGGCGGAGCTGTGA

Protein sequence :
MSRATRAAAGARVALLAAAVVLLGVAAVVSLGVGARAIAPGDVVRVLLSPDGSPDAMIVWDVRAPRAVLAVAAGAALAVA
GALVQALSRNPLAEPGVLGVTAGAGFAITVGSALGVAGAAGELLLSVLGAVLAALLVYAVGRTSPLRLVLTGVALTSVLS
GVGLGLRLLVPDVFDRYRFWAVGSLAGREQAPTTVPLLAIALALVGALVLSRQLDAVALGEGVARALGANVARVRVGALV
LVTALAGAATAVAGPILFVGLIVPHLARRAAGASVPWLVGYALVLGPVLLLLADTASRVLLPTGEVPVAIVTAFLGGPVL
AWAVRKYGAAEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-07 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-07 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-07 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-07 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_2722 YP_003100503.1 transport system permease VFG0926 Protein 1e-12 46