Gene Information

Name : Amir_2721 (Amir_2721)
Accession : YP_003100502.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 3131935 - 3132951 bp
Length : 1017 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: yen:YE3620 iron-enterobactin transporter permease

DNA sequence : 
GTGACGCGCGCGGTCGTGGTGCGCGCGGGCCGGTTCACCGCCCGCGTCGAGCGGCGCGTGCTGGTGCTGACCGGCTGCAT
GGTGGTGCTGATCCTGGGGCTCGGGCTGCTGGGGCTGTGCTACGGGGCGTCGTGGGCCTCGCCCGCCAAGGTGCTCTCCG
CGCTGACCGGGAACGGCGGGGTGGTGATCCGCGAGTGGCGGGCGCCGCGCGTGGCCGCCGGGCTGGTGTTCGGCGCGGCG
CTGGGGCTGGCGGGCGCGGTGTTCCAGAACCTGACCCGCAACCCGATGGGCAGCCCGGACGTGATCGGGCTGGACGCGGG
CGCCTACACGGGCGCGCTGATCGCGATCACCGTGCTCGCGGGCACGCCCGGTCAGCTCGCGCTCAGCTCGGTGCTCGGCG
GTGCGGTGGCCGCCGCGGCGGTGTACCTGCTGTCGCTGGGCGGCGGGCTGTCCGGGTTGCGGCTGGTGGTCATCGGCATC
GCGGTGAACGCGGTGCTGACCGCGCTGAACTCGTGGATCGTGCTGCGCGCGGAGCTGGAGGTGGCGATCGCCGCCGTGGG
CTGGAGCGCCGGTTCGCTCAACGGGGTCGGCTGGGAGGACCTGGGCATCCCGTTCACCGTGGTCGTGGTGCTGCTGGGGT
GGCTGGCGGCCCGCTCGCGGGACGTCGGCCAGGCCGGGCTCGGCCCGGAGCTGGCGGTCACCACGGGGGTCCGCCTGGAG
CGGCTGCGGTTGGAGCTGGTGGTGATCGGCGTCGGGCTGACCGCGACGGTGACCGCCGTCGCCGGGCCGGTGGCGTTCAT
CGCGCTGGCCGCGCCGCAGATCGGGCGCAGGCTCGCCCGCTCCGCCGGTGTCCCGCTGCTGCCCGCCGCCCTGACCGGCG
CCGTGCTGCTGCAGGGGGCCGACCTGGTCGCGCAGGTGCTGCTGGCCCCCGTCTCGCTTCCGGTGGGCGTGGTCAGCACG
GCCATCGGCGGCTGCTACCTGATCTGGTTGCTCACCAAGGAGGTGCGGCGGTCGTGA

Protein sequence : 
MTRAVVVRAGRFTARVERRVLVLTGCMVVLILGLGLLGLCYGASWASPAKVLSALTGNGGVVIREWRAPRVAAGLVFGAA
LGLAGAVFQNLTRNPMGSPDVIGLDAGAYTGALIAITVLAGTPGQLALSSVLGGAVAAAAVYLLSLGGGLSGLRLVVIGI
AVNAVLTALNSWIVLRAELEVAIAAVGWSAGSLNGVGWEDLGIPFTVVVVLLGWLAARSRDVGQAGLGPELAVTTGVRLE
RLRLELVVIGVGLTATVTAVAGPVAFIALAAPQIGRRLARSAGVPLLPAALTGAVLLQGADLVAQVLLAPVSLPVGVVST
AIGGCYLIWLLTKEVRRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-25 43
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 4e-25 43
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 4e-25 43
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Amir_2721 YP_003100502.1 transport system permease VFG0928 Protein 7e-17 44