|
Name : Amir_2707 (Amir_2707) Accession : YP_003100488.1 Strain : Actinosynnema mirum DSM 43827 Genome accession: NC_013093 Putative virulence/resistance : Virulence Product : transport system permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 3106565 - 3107587 bp Length : 1023 bp Strand : + Note : PFAM: transport system permease protein; ABC transporter; KEGG: rec:RHECIAT_PC0000463 iron ABC transporter, permease protein DNA sequence : GTGACCGCGCGCCGCGCGCCGCTGTGGCTCGCGGTCGTCGGCGGGCTGGCGCTGCTGCTGGTGTCCGTCGCGCTCGCGGT CACGTTCGGACCGGCGGGCATCGGCGTCTCCGACGTCTGGACGACCGTGCTCGCCCACCTCGGCTGGGGCAGCTCCTCGC TGTCGCCGCTGCGCGACGGCATCGTGTGGCACCTGCGCGTGCCCAGGACCCTGCTCGCCGCGGTCTGCGGGGCCGGGCTC GCGGTGTGCGGCGTGGTGCTCCAGTCGCTGCTGCGCAACCCGCTGGCCGACCCGTTCGTGCTCGGGGTGTCCTCGGGCGC GTCGACCGGGGCCGTGGTCGTGGTGGTGCTCGGCATCGGCGGTGGCGCGGTGACGCTGTCCGCCGGGGCGTTCGTGGGCG CGGTGTGCTCGTTCGCGCTGGTGCTGCTGCTCAGCCAGGCGCTCGGCGGGCGGGTGGACCGGGTCGTGCTGTGCGGGGTC GCGGCGATGCAGCTGTTCTCGGCGCTGACCTCGTTCATCGTGCTCACCGCCGCCGACGCCGAGACCACCAAGGGCGTGCT GTTCTGGCTGCTCGGGTCGCTGGCCGGGGCCTCGTGGACCGACGTCGCGGTGTGCGCGGTGGTGCTGGCGTTCTCGCTGG TGGTGTGCGTCGGGCACGGGCGGGCGCTGGACGCGTTCGCGTTCGGCGAGGACGCCGCCGCCGCGCTCGGGGTCCGGGTC GGGCGCACCAGGGTGGTGCTGCTGTGCGTGACCGCGCTGCTGACCGCCGCGCTGGTGAGCGTGGCGGGCGCGGTCGGGTT CGTCGGCCTGGTGCTGCCGCACGCGACGCGCGCGATCATCGGCTCCGCGCACACCCGGCTGCTGCCGGTGACGGCGCTGA CCGGCGCGGTGTTCCTGGTGTGGGTGGACACGGCGGCGCGGACCGTGCTGGAGCCGCAGGAGGTGCCGGTGGGGGTGCTG ACCTCGCTGATCGGGGTGCCCGCGTTCATCGTGGTGCTGGCGCGCGCGGGGAGGGTGTCGTGA Protein sequence : MTARRAPLWLAVVGGLALLLVSVALAVTFGPAGIGVSDVWTTVLAHLGWGSSSLSPLRDGIVWHLRVPRTLLAAVCGAGL AVCGVVLQSLLRNPLADPFVLGVSSGASTGAVVVVVLGIGGGAVTLSAGAFVGAVCSFALVLLLSQALGGRVDRVVLCGV AAMQLFSALTSFIVLTAADAETTKGVLFWLLGSLAGASWTDVAVCAVVLAFSLVVCVGHGRALDAFAFGEDAAAALGVRV GRTRVVLLCVTALLTAALVSVAGAVGFVGLVLPHATRAIIGSAHTRLLPVTALTGAVFLVWVDTAARTVLEPQEVPVGVL TSLIGVPAFIVVLARAGRVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1913 | YP_005682168.1 | Iron(III) dicitrate transport system permease fecD | Virulence | PiCp 7 | Protein | 9e-17 | 43 |
| CpC231_1907 | YP_005684260.1 | Iron(III) dicitrate transport system permease fecD | Virulence | PiCp 7 | Protein | 9e-17 | 43 |
| cpfrc_01919 | YP_003784319.1 | hypothetical protein | Not tested | PiCp 7 | Protein | 9e-17 | 43 |
| CpI19_1928 | YP_005686352.1 | Iron(III) dicitrate transport system permease fecD | Virulence | PiCp 7 | Protein | 8e-17 | 43 |
