Gene Information

Name : Amir_2408 (Amir_2408)
Accession : YP_003100194.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2666955 - 2667653 bp
Length : 699 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein

DNA sequence :
GTGATCGAGGTTGAGGGGTTGTGCAAGCGGCGCGGCGGGCGGTTCGTCGTGCGGGAGCTCGGGTTTCGGGTTGGGGCTGG
GCGGGTGACCGCCTTCCTGGGGCCCAACGGGGCCGGGAAGTCGACGACGTTGCGGGTGCTGCTCGGGTTGGACCGGGCGG
ATTCGGGGCGGGCGTTGGTGCGCGGGGTGCCCTATGCGCGGTTGCGGTGGCCGTTGCGGGTGGTCGGGGCGGTGCTGGAG
GACGGGGCGCACCCGGCTCGCAGCGGGCGCGGGCACCTGGGGTGGGTGGCGCGCAGCAACGGGATCGCGCTGTCGCGGGT
TTCGGAAGTGCTTGGGGTGGCTGGGCTTTCCGACTTCGGCGGGGTTCGGGTTGGGGCTTACTCGTTGGGGATGCGGCGGC
GGTTGGCCGTTGCCTGCGCGCTGTTGGGTGAGCCCGAGGTGCTGGTGCTGGACGAGCCGCTGAACGGGCTCGATCCCGAG
GGGATCAGGTGGTTGCGGCGGGTGGTGCGGGAGTTCGCCGACTCGGGTGGGGCGGTGCTGTTGTCCAGCCACCTGGTCGC
GGAGGCCGAGGCTGTGGCGGATGACGTCGTGGTGGTGGACCGGGGGCGGTTGGTCGCCTCCGGGACGGTCGCGGAGGTCG
TGGGGGCGCGGGGGAGCTTGGAAGAGGCGTTCTTCGCGCTGACCGGGGGTGCGGCGTGA

Protein sequence :
MIEVEGLCKRRGGRFVVRELGFRVGAGRVTAFLGPNGAGKSTTLRVLLGLDRADSGRALVRGVPYARLRWPLRVVGAVLE
DGAHPARSGRGHLGWVARSNGIALSRVSEVLGVAGLSDFGGVRVGAYSLGMRRRLAVACALLGEPEVLVLDEPLNGLDPE
GIRWLRRVVREFADSGGAVLLSSHLVAEAEAVADDVVVVDRGRLVASGTVAEVVGARGSLEEAFFALTGGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 4e-40 50
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 4e-40 50
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-42 49
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 2e-40 44