Gene Information

Name : Amir_1940 (Amir_1940)
Accession : YP_003099734.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2151683 - 2152603 bp
Length : 921 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ccs:CCNA_01205 ABC transporter ATP-binding protein

DNA sequence :
ATGGCAACCACAACTGCTCCGGCGGCGGTCTCGCTGCGCGGGGTGCGCAAGTCACGCGGAGCCGTCAGGGCGGTGGACGG
GGTCGACCTCGTCGTCGCGCCCGGCGAGGTGGTGGCGCTGCTCGGCCCGAACGGCGCGGGCAAGTCCACCACCGTGGACG
TCCTGCTCGGGCTCACCGCCCCGGACGCCGGGGAGGTCCGGCTGTTCGGCCGCACGCCCAGGCAGGCCGTCGTGGACGGC
CTGGTCGGCGCGGTGCTCCAGGACGGGGCGCTGCTGGAGGGCGCGACGGTCGGCGAGGTCGTCGGCCTGGTCGCCGCGCT
GCACCGCCGCCCGCTGCCGGTCGCCGAGGCGCTGGCCCTGGCGGGCGCGACGGACCTGGCGCGCCGCCGCTCCACCGAGC
TGTCCGGCGGCCAGCGCAAGCGCGCCCTGCTCGCCACCGCCCTCGTGCCCGACCCTGACCTGCTGGTCCTGGACGAGCCC
ACCGCGGCCCTGGACGTCCAGTCCCGCCGCCGCTTCTGGGCCACCACGCGCGAGCACACCGCGCGCGGCCGGACCGTCCT
GTTCGCCACCCACCACCTGGAGGAGGCGCAGGAGTTCGCCGACCGGGTCGTGCTGCTCGACGGCGGGAAGGTCATCGCGG
ACGGCACCGTCGCGCAGATCCGGACCGCCGTGTCCGGCCGCGTCATCGCCGCCACGCTCCCCGGAGCGTCGGCCCCCGGC
GCCGATCTCGCCCCGCTGCGCGCGCTGCCCGGCGTGCGCGCGGTCGAGACCCGCGGCGACCGGGTCCTGCTGGAGTGCGC
CGACTCGGACGCCGCGCTGCGCGCCCTGCTCGCCACCCACCCCACCACCCACGACGTCGAGGTCACCGCGCTGGGCCTGG
AAGCGGCCTTCCTCGCGCTGACCGGACGGGAGAACCGGTGA

Protein sequence :
MATTTAPAAVSLRGVRKSRGAVRAVDGVDLVVAPGEVVALLGPNGAGKSTTVDVLLGLTAPDAGEVRLFGRTPRQAVVDG
LVGAVLQDGALLEGATVGEVVGLVAALHRRPLPVAEALALAGATDLARRRSTELSGGQRKRALLATALVPDPDLLVLDEP
TAALDVQSRRRFWATTREHTARGRTVLFATHHLEEAQEFADRVVLLDGGKVIADGTVAQIRTAVSGRVIAATLPGASAPG
ADLAPLRALPGVRAVETRGDRVLLECADSDAALRALLATHPTTHDVEVTALGLEAAFLALTGRENR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_1950 YP_005163395.1 ABC transporter ATP-binding protein Not tested Not named Protein 3e-46 43