|
Name : Amir_1933 (Amir_1933) Accession : YP_003099727.1 Strain : Actinosynnema mirum DSM 43827 Genome accession: NC_013093 Putative virulence/resistance : Resistance Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2146634 - 2147359 bp Length : 726 bp Strand : - Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcb:BCB4264_A5589 DNA-binding response regulator YycF DNA sequence : GTGGGCGGGACCTTCGTCCTGAGCCGGGTGGGGGAAGCTTGGCGGGTGGAGTTCTCGGTACTGCTCGTGGAGGACGACGA GCACATCAGGCAGGCGCTGGGTCTGGCGCTGGGCGACGAGGGGTTCGGCGTCACCGACGCCGTGTCCGGCGAGGAGGCCC TGCGCCTTCTGGACCGCCGCGTGTTCGACGTGGTCCTGCTGGACCTGTCGCTGCCCGGCGTGGACGGCCTGGAGGTGTGC CGGGTCCTGCGGGCGCGCGGCGACCTCCCGATCATCATCGTCACGGCCCGCGCCGACACCGCCGACGTCATCGCGGGACT GGAGGCGGGCGCCGACGACTACGTGACCAAGCCCCTGGTGGCGGGCGAGCTGGCCGCCCGCATCCGCGCGCTCCTGCGCC GCCGGGGCGGTGGCGGCGAGGAGGCCCTCCGCTTCGGCGACCTGGAGGTGCGCGCGGGCGAGGGCGTGGTCCTGCGCGCG GGCGACGAGGTCCACCTGACCCGCACCGAGTTCCGCCTCCTCGTCGAGCTCGCCTCGGCCGCCGGACGCGTCGTCACCAG GGAGCAGCTCCTCCAGCGCGTCTGGGGCTACGACTACTTCGGCGACACCCGCCTCCTGGACGTGCACATCCGCAGGCTGC GCCGCAAGGTCGAGCAGAACCCCGACGACCCCGCCCTCGTCCTCACCGTGCGCGGCGCGGGCTACCGCCTAGACCCCGAC CAGTGA Protein sequence : MGGTFVLSRVGEAWRVEFSVLLVEDDEHIRQALGLALGDEGFGVTDAVSGEEALRLLDRRVFDVVLLDLSLPGVDGLEVC RVLRARGDLPIIIVTARADTADVIAGLEAGADDYVTKPLVAGELAARIRALLRRRGGGGEEALRFGDLEVRAGEGVVLRA GDEVHLTRTEFRLLVELASAAGRVVTREQLLQRVWGYDYFGDTRLLDVHIRRLRRKVEQNPDDPALVLTVRGAGYRLDPD Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 4e-22 | 42 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 8e-22 | 42 |
| vanRB | YP_008394254.1 | DNA-binding response regulator VanRB | Not tested | Not named | Protein | 9e-23 | 41 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 3e-24 | 41 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 2e-24 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | AE000516.2.gene3505. | Protein | 3e-36 | 48 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_012469.1.7686381. | Protein | 2e-28 | 45 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | AF310956.2.orf0.gene | Protein | 4e-23 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | BAC0125 | Protein | 5e-21 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_010079.5776364.p0 | Protein | 2e-23 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_002952.2859858.p0 | Protein | 2e-23 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_007622.3794948.p0 | Protein | 2e-23 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_003923.1003417.p0 | Protein | 2e-23 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_013450.8614146.p0 | Protein | 2e-23 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_002951.3238224.p0 | Protein | 2e-23 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_007793.3914065.p0 | Protein | 2e-23 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_002758.1121390.p0 | Protein | 2e-23 | 41 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | NC_012469.1.7685629. | Protein | 5e-32 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | VFG1389 | Protein | 3e-19 | 43 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 1e-25 | 42 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | VFG1563 | Protein | 2e-22 | 42 |
| Amir_1933 | YP_003099727.1 | winged helix family two component transcriptional regulator | VFG1702 | Protein | 3e-22 | 42 |
