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Name : Amir_0118 (Amir_0118) Accession : YP_003097935.1 Strain : Actinosynnema mirum DSM 43827 Genome accession: NC_013093 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 125363 - 126613 bp Length : 1251 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGATCGACCTCAAGGCACTGCGCGAGAACCCGGAAGCCGTTCGTGCGTCCCAGCGGGCGCGGGGCGAGGACGAGTCCCT GGTCGACGCCCTGCTGTCCGCCGACGAGCGCCGCCGGTCCGCCGTCTCCCGCGCCGACACGCTGCGCGGTGAGCAGAAGG CGTTCGGCAAGCAGGTCGGCAAGGCCCGCGGTGAGGAGCGCGAGGCGCTGCTCGTCAAGGGCAAGGAGCTGGCCGCCGAG GTGAAGGCCGCCGAGGCCGACCAGGCCGCCGCCGAGGCCGAGCTGACCGAGCTGCACCGCTCCGTCCCCAACCTCGTGCA CCCCGACGCCCCCGAGGGCGGCGAGGACGATTACGTCGTGGTCAAGCACGTCGGGGAGCCCCGCGAGTTCGACTTCGAGC CCCTCGACCACCTCGACCTCGGCACCCGGCTCGGCGCGATCGACATGGAGCGCGGCGCCAAGGTGTCCGGCTCGCGGTTC TACTTCCTCACCGGCATCGGCGCCCAGCTCGAGCTCGCCCTGCTGAACATGGCCGTCGCCCAGGCGACCGCCGCGGGCTT CCAGCTCATGATCACCCCGACCCTGGTCCGGCCCGAGGTCATGGCGGGCACCGGGTTCCTCGGCGCGCACTCCAGCGAGA TCTACCGCCTGGAGGCCGACGACCTCTACCTCGTCGGCACCTCCGAGGTCCCCCTCGCCGGCTACCACGCCGACGAGATC ATCGACGGCCCGCGCCGCTACGCGGGCTGGTCGTCCTGCTACCGCCGCGAGGCGGGCTCCTACGGCAAGGACACCAGGGG CATCATCCGGGTGCACCAGTTCAACAAGGTCGAGATGTTCTCCTACGTCCCGCCGGAGGAGGCCGAGGCCGAGCACGCCC GCCTGCTCGCCTGGGAGGAGGAGATGCTCGCCAAGGTCGAGGTCCCCTACCGGGTGATCGACACCGCCGCGGGCGACCTC GGCACCAGCGCCTCCCGCAAGTTCGACTGCGAGGCGTGGGTGCCCAGCCAGCAGGCCTACCGCGAGCTCACCTCCACCTC GAACTGCACCACCTTCCAGGCCCGCAGGCTGAACGTGCGCTACCGCGACGAGAACGGCAAGTCGCAGATCACCGCCACGC TCAACGGCACCCTGGCCACCACCCGCTGGATCGTCGCCATCCTGGAGAACCACCAGCAGGCCGACGGCTCCGTCGTCGTC CCGCAGGCGCTGCGCCCGTTCCTGGGCAAGGACGTCCTCCTCCCGGCCTGA Protein sequence : MIDLKALRENPEAVRASQRARGEDESLVDALLSADERRRSAVSRADTLRGEQKAFGKQVGKARGEEREALLVKGKELAAE VKAAEADQAAAEAELTELHRSVPNLVHPDAPEGGEDDYVVVKHVGEPREFDFEPLDHLDLGTRLGAIDMERGAKVSGSRF YFLTGIGAQLELALLNMAVAQATAAGFQLMITPTLVRPEVMAGTGFLGAHSSEIYRLEADDLYLVGTSEVPLAGYHADEI IDGPRRYAGWSSCYRREAGSYGKDTRGIIRVHQFNKVEMFSYVPPEEAEAEHARLLAWEEEMLAKVEVPYRVIDTAAGDL GTSASRKFDCEAWVPSQQAYRELTSTSNCTTFQARRLNVRYRDENGKSQITATLNGTLATTRWIVAILENHQQADGSVVV PQALRPFLGKDVLLPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-63 | 43 |
