Gene Information

Name : Amir_0995 (Amir_0995)
Accession : YP_003098797.1
Strain : Actinosynnema mirum DSM 43827
Genome accession: NC_013093
Putative virulence/resistance : Unknown
Product : helicase c2
Function : -
COG functional category : K : Transcription
COG ID : COG1199
EC number : -
Position : 1110535 - 1112580 bp
Length : 2046 bp
Strand : -
Note : SMART: helicase c2; DEAD-like helicase; KEGG: mxa:MXAN_6717 ATP-dependent helicase

DNA sequence :
GTGCCCCCCGCCATCACCACCGTCCCCGACACCCGCGCGCTCCTGGCCATCGCCGTGAAGGCCGTGGGCGGAGCCGAGCG
CGAGGGGCAGGTGGACATGGCGCTCGCCGTCGAGCGGTCCATCCGCACCGGCGAGCACCTCGCCGTCCAGGCGGGCACCG
GCACCGGCAAGTCGCTGGCCTACCTGGTCCCCGCGCTGCGGCACGCCGTCGCCGAGGAGAGCACCGTCGTCATCTCGACC
GCGACGATCGCCCTGCAGCGCCAGCTCGTGGACCGGGACCTGCCGCGCCTGGCGAAGGCGCTGCGCAAGGAGCTGGGCCG
GGAGCCGCGCTTCGCGATCCTCAAGGGCAGGCGCAACTACCTCTGCATGCACCGCCTGCACAGCGGCGCCCCGGACGAGC
CCGAGGACGCCGCGCTGTTCGACCCGTTCGCGGTGTCCAAGCTCGGCCGCGAGGTGAAGCGGCTGCACGAGTGGTCCTCC
GACACCGAGACCGGCGACCGGGACGAGCTGGTGCCGGGCGTGCCCGACCAGGCGTGGAAGCAGGTGTCGGTCACCGCGCG
CGAGTGCCTCGGCGTGAGCAAGTGCCCCATCGGCACGGACTGCTTCGCGGAGAAGGCCCGCGCCGAGGCGGGGCGGGCGG
ACGTCGTGGTCACCAACCACGCGATGCTCGCCATCGACGCCCTGGAGGGCTACCAGGTGCTGCCCGACCACGACGTGGTC
GTGATCGACGAGGCGCACGACCTGGTCGACCGGGTCACCTCCGTGGCGACCGAGGAGCTGGGCTCGGCGGCGATCACGAC
GGCGGCCCGGCGGTGCGGCAAGCTCGTCGACCAGGCCGTCGCGGACCGGCTCGCCGAGGCCGGTGACGGGCTCGGGATGC
TGCTGGAGGACGCGCCCGCAGGGCGGTTGGAGTCGCTGCCGAAGGCGCTGGCCACGACGGTGGCCGCGGTGCGGGACGCG
GCGCGGGTGTGCATCACCTCGCTCGGGCCCGAGCGCAAGGAGGACGTGGAGGGCTCGACGGCGCGGAAGCTGGCGCTGTC
GCTGCTGGACGACATCCACGACTGCGCGGTGCGGGTGCTGGAGGCGTTCGACGACGAGCACGACGTGGTGTGGGTGTCCG
GCGACTTCGGCGGGAACCGCGCGCCGGTGCTGCGGGTCGCGCCGCTGGGCGTGGGCGGGCTGCTGCGGGAGCGGCTGTTC
GGCAAGCGCACCACGGTGCTGACGTCGGCGACGCTCACCCTGGGCGGCACGTTCGACACGCTGGCCAGGCAGTGGGGGCT
GCCCGCGGCGTCGGGGGCGCGGAAGGCCGAGGGCAGCGGGAAGGCAGCGGGGACCGCCACCGACAAGGAGCCGCCGTCGG
ACCTGGGCGCGGTGAGGTGGACCGGGCTGGACGTGGGCTCGCCGTTCGAGCACGGCAGCAGCGGCATCCTGTACGTGGCG
CGGCACCTGCCCCCGCCCGGTCGCGACGGCCTGCCGCCCGCGTACCTGGACGAGCTGGAGGGCCTGGTGAACGCGGCGGG
CGGGCGCGCGCTGGGGCTGTTCTCCTCGATGCGCGCGGCGAAGGCGGCGACCGAGGCGCTGCGCGGGCGGGTGGACTTCC
CGGTGCTGTGCCAGGGCGACGACCAGACCGGGCAGCTGGTGAAGCGGTTCGCCGAGGACGCGCGGACGTGCCTGTTCGGC
ACGCTGTCGCTGTGGCAGGGCGTGGACGTGCCCGGCCCCTCGCTGCAGCTGGTGGTGATGGACCGCATCCCGTTCCCCAG
GCCGGACGACCCGCTGGCGTCGGCGCGGCAGAAGGCCGTGGACTCCAGGGGCGGCAACGGGTTCCTGACCGTGTCGGCCA
CGCACGCGGCGCTGCTGCTGGCGCAGGGCGCGGGGCGGTTGCTGCGGTCGATGAACGACAAGGGCGTGGTGGCGGTGCTG
GACCCGAGGCTGGCGACGGCGCGCTACGGCGGTTTCCTGCGCGCGTCGCTGCCGCCGTTCTGGACCACGTACGACACCGA
GGTGGTCAAGGCGGCGCTGAAGCGGCTGGACGCGGCGAACAAGTAG

Protein sequence :
MPPAITTVPDTRALLAIAVKAVGGAEREGQVDMALAVERSIRTGEHLAVQAGTGTGKSLAYLVPALRHAVAEESTVVIST
ATIALQRQLVDRDLPRLAKALRKELGREPRFAILKGRRNYLCMHRLHSGAPDEPEDAALFDPFAVSKLGREVKRLHEWSS
DTETGDRDELVPGVPDQAWKQVSVTARECLGVSKCPIGTDCFAEKARAEAGRADVVVTNHAMLAIDALEGYQVLPDHDVV
VIDEAHDLVDRVTSVATEELGSAAITTAARRCGKLVDQAVADRLAEAGDGLGMLLEDAPAGRLESLPKALATTVAAVRDA
ARVCITSLGPERKEDVEGSTARKLALSLLDDIHDCAVRVLEAFDDEHDVVWVSGDFGGNRAPVLRVAPLGVGGLLRERLF
GKRTTVLTSATLTLGGTFDTLARQWGLPAASGARKAEGSGKAAGTATDKEPPSDLGAVRWTGLDVGSPFEHGSSGILYVA
RHLPPPGRDGLPPAYLDELEGLVNAAGGRALGLFSSMRAAKAATEALRGRVDFPVLCQGDDQTGQLVKRFAEDARTCLFG
TLSLWQGVDVPGPSLQLVVMDRIPFPRPDDPLASARQKAVDSRGGNGFLTVSATHAALLLAQGAGRLLRSMNDKGVVAVL
DPRLATARYGGFLRASLPPFWTTYDTEVVKAALKRLDAANK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1474 YP_001800868.1 ATP-dependent DNA helicase Not tested Not named Protein 3e-143 52