Gene Information

Name : FIC_00351 (FIC_00351)
Accession : YP_003094880.1
Strain : Flavobacteriaceae bacterium 3519-10
Genome accession: NC_013062
Putative virulence/resistance : Virulence
Product : Lipid carrier : UDP-N-acetylgalactosaminyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : 2.4.1.-
Position : 356043 - 356651 bp
Length : 609 bp
Strand : +
Note : -

DNA sequence : 
ATGTATAAATTATTCTGGAAACGCCTGATCGATTTCACCGCCGCTCTTGTTGGTCTGATTATCCTGAGCCCTGTATTTCT
GTTAATTACCCTGTGTCTTGCTATCGCGAACAGCGGCAAACCGTTTTTCTTTCAGAAAAGACCGGGAATTAAAGAAAAGA
TTTTCAGCATTATTAAGTTCAAAACGATGAATGACCGTAGGGACAGCAAGGGTGATTTACTGTCCGATTACAAGCGGCTG
ACCCGCATCGGGAGTTTTGTGCGTAAGACCTCCCTCGATGAAATCCCGCAACTGATCAATGTGCTGAAAGGGGAAATGTC
GCTGATCGGGCCGCGACCCTTGCTGCCTGAATATTTACCCCTATACACTTCCATCCAAAAACGCCGCCACGAAGTGAGAC
CCGGCATTACCGGCTGGGCGCAGGTGAATGGGCGCAATGCAATAAGCTGGGAAGATAAGTTTACATTCGATGTTTGGTAT
GTGGACAACCTCAGCCTCAGCCTTGACCTTAAAATTCTTTTGATGACCGTAAAAAAAGTATTCAAATCCGAAGGAATTAA
CGCCGCAGGCCAAGCCACGACAGAACATTTTAAAGGAAGTTCAATATGA

Protein sequence : 
MYKLFWKRLIDFTAALVGLIILSPVFLLITLCLAIANSGKPFFFQKRPGIKEKIFSIIKFKTMNDRRDSKGDLLSDYKRL
TRIGSFVRKTSLDEIPQLINVLKGEMSLIGPRPLLPEYLPLYTSIQKRRHEVRPGITGWAQVNGRNAISWEDKFTFDVWY
VDNLSLSLDLKILLMTVKKVFKSEGINAAGQATTEHFKGSSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-15 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FIC_00351 YP_003094880.1 Lipid carrier : UDP-N-acetylgalactosaminyltransferase VFG1309 Protein 2e-20 42
FIC_00351 YP_003094880.1 Lipid carrier : UDP-N-acetylgalactosaminyltransferase VFG1369 Protein 7e-13 41