Gene Information

Name : FIC_00329 (FIC_00329)
Accession : YP_003094858.1
Strain : Flavobacteriaceae bacterium 3519-10
Genome accession: NC_013062
Putative virulence/resistance : Virulence
Product : UDP-glucose 4-epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : 5.1.3.2
Position : 331326 - 332297 bp
Length : 972 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAATATATTAATAACAGGGGGTGCAGGGTTTATTGGCAGTAATCTGTGTGACCACTTTATAGCGAAAGGATATAA
AGTAACCTGCCTCGACAGTTTCATCACAGGACATCGGCGCAACCTCATCCAATTGATGGAGCATCCTGACTTTACACTGA
TTGAAGGAGATATCCGTGAGATTGAGACATGTAGAAAAGCTTGTGAAGGCATGGATTACGTGCTGCATCAGGCCGCTCTG
GGCTCGGTGCCAAGATCCATTAATGATCCGATCACGAGCAACGATGTTAATGTTGGGGGATTCCTCAATATGCTTGTGGC
CGCCAGGGATGCCAAGGTAAAACGTTTTGTCTATGCGGCATCATCGTCGACATACGGCGATTCCGCGAGCCTGCCAAAGG
TTGAGGATGTAATCGGTAAGCCGCTTTCACCTTACGCTGTAACAAAATATGTAAATGAACTTTATGCCGACGTCTTTTCG
AAGACGTATGGCATCGAATGTATTGGGCTGCGTTACTTCAATGTTTTTGGACGCAGGCAGGACCCTAATGGTGCATATGC
CGCCGTTATACCCAAGTTTGTCATCCAGCTGATGAAGCACCAGTCGCCCACGATTAACGGAGCAGGTGATTACTCGCGCG
ACTTCACGTACATCGACAATGTAATCCAGATGAATGAACGCGCGATGCTGACTGATAATCACGATGCGGTCAATACCGTC
TACAATACAGCGGTGGGCGACCGTACTACGATCAGAGAAATGGCTGACCTGTTAAAAGAATATCTGTCCGCATATGACCC
GGAAATCGGTAACATCGAAATTCTTCATGGGCCTGTCCGGACGGGCGATGTGCCACATTCAAAAGCCAGCATAGAGAAGG
CTATGAACCTGTTAAACTATTCCCCAAGCCATGTATTTAAGCATGGTCTTAAGGAGGCGGTCGACTGGTACTGGGAGTAC
TTACCACGATAG

Protein sequence : 
MKNILITGGAGFIGSNLCDHFIAKGYKVTCLDSFITGHRRNLIQLMEHPDFTLIEGDIREIETCRKACEGMDYVLHQAAL
GSVPRSINDPITSNDVNVGGFLNMLVAARDAKVKRFVYAASSSTYGDSASLPKVEDVIGKPLSPYAVTKYVNELYADVFS
KTYGIECIGLRYFNVFGRRQDPNGAYAAVIPKFVIQLMKHQSPTINGAGDYSRDFTYIDNVIQMNERAMLTDNHDAVNTV
YNTAVGDRTTIREMADLLKEYLSAYDPEIGNIEILHGPVRTGDVPHSKASIEKAMNLLNYSPSHVFKHGLKEAVDWYWEY
LPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-76 54
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-76 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FIC_00329 YP_003094858.1 UDP-glucose 4-epimerase VFG0430 Protein 6e-77 54