Gene Information

Name : FIC_01817 (FIC_01817)
Accession : YP_003096322.1
Strain : Flavobacteriaceae bacterium 3519-10
Genome accession: NC_013062
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1952060 - 1952752 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGCTATTAATAAAGGACTTACATAAATCGTACGATACCGGCAAAAGTAAACTTCATGTTCTGAAGGGCATTAACCTCAC
AATTGATGAGGGTGAATTTGTATCAATCATGGGAAGTTCGGGTTCGGGAAAATCCACGCTTCTTAATATCATCGGAATTC
TGGATGAAAAAGACTCGGGAATTTATGATCTGGACGGTATCGCGATTGAAGAACTGTCGGAAATAAAGGCAGCCGAGTAC
AGAAGCCGCTTCCTTGGTTTTATTTTCCAGTCGTTTAATCTCATTGGGTACAAGAATGCGCTTGAAAATGTTGCACTACC
ACTCTACTACCAAAATGTTTCGCGGAAAGAACGTAATAAGAAAGCCCTTGAATATCTGGAAAAAGTAGGGCTCGCGGAAT
GGGCAAATCACCTTCCTAATGAACTTTCGGGTGGACAGAAACAAAGAGTCGCCATTGCACGCGCACTGATCACTGACCCT
AAAGTAATTCTGGCCGATGAGCCAACCGGCGCGCTGGATTCTAAAACAACCTACGACATCATGAAGCTTCTGCAGGAAAT
AAACCGCGAAGGCAAAACCATAATCGTCGTTACGCACGAGCCTGATGTTGCCGCCCAGACAAAAAGAAACGTCATCCTGA
AAGACGGCATCATCGAAAGCGACGAATTCATTGCCCAAAAAGTGTTGGTATAA

Protein sequence : 
MLLIKDLHKSYDTGKSKLHVLKGINLTIDEGEFVSIMGSSGSGKSTLLNIIGILDEKDSGIYDLDGIAIEELSEIKAAEY
RSRFLGFIFQSFNLIGYKNALENVALPLYYQNVSRKERNKKALEYLEKVGLAEWANHLPNELSGGQKQRVAIARALITDP
KVILADEPTGALDSKTTYDIMKLLQEINREGKTIIVVTHEPDVAAQTKRNVILKDGIIESDEFIAQKVLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-36 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FIC_01817 YP_003096322.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-59 58
FIC_01817 YP_003096322.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-37 46
FIC_01817 YP_003096322.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-41 45
FIC_01817 YP_003096322.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-28 43
FIC_01817 YP_003096322.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FIC_01817 YP_003096322.1 ABC transporter ATP-binding protein VFG0869 Protein 3e-23 42