Gene Information

Name : FIC_01743 (FIC_01743)
Accession : YP_003096248.1
Strain : Flavobacteriaceae bacterium 3519-10
Genome accession: NC_013062
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 1868394 - 1869779 bp
Length : 1386 bp
Strand : -
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
GTGACAGGGAAGAGTTATGCAAATATTAAAGAAAATTTATTAAATAAAAACTATAATATGAATATTTTAAAAGGAACAAA
AGAGTTTTTTCCTGGAGTTGAACAAATTAAATTCGAGGGTGTCGAAAGCAGAAACCCGCTCGCCTTCCGATATTATGATG
CAGACCGCGTGGTAATGGGCAAGCCGATGAAAGAGTGGATGCGTTTTGCAACCGCCTGGTGGCACACGCTGTGCGCGGAC
GGCAGCGATCCGTTTGGTGGACCAACAATTCATCATCCGTGGGGAACCGCGTCTGACGTGATCGACCGTGCGAAATATAA
AATGGATGCAGGTTTCGAATTTATGACCAAAATGGGATTCGGATATTACTGTTTTCATGATGTGGATTTGGTAGATCCTT
CCGATAACTGGAAAGAATACGAAGCTAACCTTCAGACGATTGTAGAATATGCCAAGGAAAAGCAGGCTGCTTCCGGTATC
AAACTGCTTTGGGGCACCGCCAATGTCTTTTCGCACGAGAGATATATGAACGGAGCATCCACGAATCCAAATTTCGATGT
GGTGGCGTGCGCGGCTACTCAGGTTAAAAATTCTATCGACGCAACCATCGCGCTTGGTGGTGAAAATTACGTTTTCTGGG
GCGGAAGAGAGGGTTACATGAGCCTTTTGAACACTGATATGAAGCGTGAAAAAGATCACCTCGCGAGATTCCTTACGATG
TCAAGAGATTATGCACGTTCGCAGGGTTTTAAAGGAACTTTTCTGATCGAACCTAAACCAATGGAGCCCACCAAACATCA
GTACGATTACGATGCGGAAACGGTGATCGGCTTCCTCAGATATTATGGTTTGGATAAAGATTTTAAACTCAACCTTGAAG
TAAACCACGCAACACTGGCAGGCCACACCTTCGAACATGAACTTCAGGCCGCTGTAGATGCGGGAATGCTCGGAAGCATC
GACGCGAACCGTGGTGATGCACAAAACGGCTGGGATACCGATCAGTTCCCGATTGATACGTTCGATCTTACCCAGGCCTG
GCTTGCGATTCTGCCAAATGGCGGTCTGGGAAGCGGCGGAATTAATTTCGATGCCAAAATCCGCAGAAATTCTACCGATG
CCGAAGACCTCTTTATCGCGCACGTGGCTGGTATGGACGCTTTTGCGCGCGGACTTATCGCTGCAGCAGGCATCCTTGAA
AATTCAGATTATAACAAACTGAGAACGGAGCGTTATGCCTCATTCGACAGCGGAAACGGAAAAGCCTTCGAACAGGGCAC
CCTTACGCTCGAGGATTTAAGAAAAATTGCTCACGAATCCGGCGAGCCTCAGCCGAAAAGCGGCAAGCAGGAGCTGTTTG
AAGCCATCGTAAATATGTATATCTAA

Protein sequence :
MTGKSYANIKENLLNKNYNMNILKGTKEFFPGVEQIKFEGVESRNPLAFRYYDADRVVMGKPMKEWMRFATAWWHTLCAD
GSDPFGGPTIHHPWGTASDVIDRAKYKMDAGFEFMTKMGFGYYCFHDVDLVDPSDNWKEYEANLQTIVEYAKEKQAASGI
KLLWGTANVFSHERYMNGASTNPNFDVVACAATQVKNSIDATIALGGENYVFWGGREGYMSLLNTDMKREKDHLARFLTM
SRDYARSQGFKGTFLIEPKPMEPTKHQYDYDAETVIGFLRYYGLDKDFKLNLEVNHATLAGHTFEHELQAAVDAGMLGSI
DANRGDAQNGWDTDQFPIDTFDLTQAWLAILPNGGLGSGGINFDAKIRRNSTDAEDLFIAHVAGMDAFARGLIAAAGILE
NSDYNKLRTERYASFDSGNGKAFEQGTLTLEDLRKIAHESGEPQPKSGKQELFEAIVNMYI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 4e-104 52
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 3e-104 52