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Name : FIC_00139 (FIC_00139) Accession : YP_003094676.1 Strain : Flavobacteriaceae bacterium 3519-10 Genome accession: NC_013062 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 131601 - 132869 bp Length : 1269 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTACAGGTTAATTTTTTGCGCGAAGAACGCGAGCGTGTTTTAGAAGGTTTAAATAAACGGAATTTCCGGCAGATTTC TTTGGTTGACGAAGCCATTGAAACTGATGACGAAAGAAAGAAATTTCAGACCGAACTTGACCAGAATTTGTCGGAGATGA ATAAAATTTCGAAAGAAATCGGCATCCTGATGAAAGAAGGCAGGAAAGACGAGGCCGAGACCGCGAAATCTAAAACCGCT GCATTTAAAGAAAATGTTCAGAATCTCCAGCAGCAGCTGAAAGATGCCGAAGCAAAGCTTCTTGAAATTCTATACCAGAT TCCGAATATCCCAAACACAAAAGTTGTTGCCGGTACCGCTGCCGAGGATAACGAAATTGTTTACCAGTCGCATGATGTGG AAGGTTTGGGCGAAGGCGCAATTCCACACTGGGAACTCGCCAAAAAGTATAATTTAATAGATTTTGAACTCGGGGTGAAA GTTGCAGGTGCCGGTTTTCCGGTGTATTTTGGCAAAGGCGCGCGATTACAGCGGTCTTTGGTGCAATACTTTTTAGATAA AAATACCGATGCCGGTTATCTTGAGGTTAATCCGCCACATGTTGTAAACGAAGCTTCGGGTTACGGTACCGGGCAGCTGC CGGATAAAGAGGGACAGATGTATTACGCTCCCGAAGATAAACTGTACCTGATCCCGACAGCAGAAGTTCCGGTTACAAAC CTTTACCGTGATGTTTTGTTGGAAGAGCGCGAACTGCCGATTAAAAACACCGCTTTTTCGCAGTGCTACCGCCGCGAAGC CGGAAGTTATGGCGCGCATGTTCGGGGCCTCAACAGGCTTCATCAATTCGAAAAGGTAGAAATAGTAAGGCTTGAAAAAC CCGAAAATTCGTACGCTGCGCTCGATGAGATGGTAGAACACGTGAAGACTCTTCTTACGGAACTGGAATTACCGTTCCGC ATCTTGCGTCTTTGCGGTGGCGATATGGGTTTCACGTCGTCGATGACTTACGATTTTGAAGTGTGGAGTGCCGCACAGGA AAAATGGCTCGAAGTTTCTTCAGTTTCAAATTTTGAGACTTTCCAGGCAAACAGATTGAAATGCAGGTTCAGAACCGATG GAAAGACTCAGTTAGTCCACACCCTGAATGGTTCAGCACTTGCGCTGCCGAGAATTATGGCGGCTCTTTTAGAAAATAAC CAAACGGCGGACGGCATTAAGATTCCGGCAAAAATTGCGGAATACACCAAGTTCGACTTGATTAGCTAA Protein sequence : MLQVNFLREERERVLEGLNKRNFRQISLVDEAIETDDERKKFQTELDQNLSEMNKISKEIGILMKEGRKDEAETAKSKTA AFKENVQNLQQQLKDAEAKLLEILYQIPNIPNTKVVAGTAAEDNEIVYQSHDVEGLGEGAIPHWELAKKYNLIDFELGVK VAGAGFPVYFGKGARLQRSLVQYFLDKNTDAGYLEVNPPHVVNEASGYGTGQLPDKEGQMYYAPEDKLYLIPTAEVPVTN LYRDVLLEERELPIKNTAFSQCYRREAGSYGAHVRGLNRLHQFEKVEIVRLEKPENSYAALDEMVEHVKTLLTELELPFR ILRLCGGDMGFTSSMTYDFEVWSAAQEKWLEVSSVSNFETFQANRLKCRFRTDGKTQLVHTLNGSALALPRIMAALLENN QTADGIKIPAKIAEYTKFDLIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-66 | 41 |
