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Name : Phep_4177 (Phep_4177) Accession : YP_003094430.1 Strain : Pedobacter heparinus DSM 2366 Genome accession: NC_013061 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 5050887 - 5053214 bp Length : 2328 bp Strand : - Note : PFAM: S1 RNA binding domain; Tex-like protein N-terminal domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region DNA sequence : ATGAGCAATCATTCTAAAATCATTGCTGCTGAACTGGCAGTAACGGAAAAGCAGGTCATCGCTACTATTGAATTACTGGA TGAGGGGGCAACGGTTCCCTTTATTTCACGTTACCGGAAAGAAGTGACAGGAAGTCTGGATGAAGTGCAGGTAGCAGGTA TCCGCGATAGGTTCCAACAGTTAAGAGAGCTGGATAAACGTCGGGAAGCCATTTTAAAAGCCCTAACAGCGCTGGATAAA CTTACACCTGAGCTGGAAGCACAAATTAATGCGGCAACCAATATTGCAGCAATTGAAGATATTTATCTGCCTTATAAGCC CAAACGCAAAACCAGAGCATCTGAGGCCCGGAAAAAGGGATTGGAACCCTTGGCGTTATTTATCCTGGAGCAGGCTAAAA CGGATCCGGAAATTGAAGCAGGTAAATTTTTAAATGATGAGCTTGGGGTCGGATCTTTAGAAGATGCGCTTGCTGGTGCA AGGGATATCATTGCCGAATTGGTCAATGAAAATGCAGAGGCCAGAACTGCAATGCGGAATTATTTCCAGCAAAAAGCTGT ATTTAAGTCTGCCGTAATTAAGGGCAAAGAAGAAGAAGGGATTAAGTATAAAGATTATTTTGACTGGCAGGAACCGTTAA AAAATGCGCCATCACACCGGGTTCTGGCTATACGCAGAGGCGAAAATGAGGCGATCCTGAAACTGGAGGCCATGCCCGAG GAAGATGGTGCCATCAGGATTTTGGAAAGCCAGTTTGTTAAAGGGAATAATGCCTGTGCAGATCAGGTAAAACTGGCTAT ACAGGATAGTTATAAGCGTTTGCTGGGGCCTTCGATGGAAACGGAGATCCGTAATCTTTCTAAGGAAAAAGCAGATGAAG AAGCCATTCGTGTATTTGCAGAAAATGCACGCCAATTGTTGCTCGCCGCCCCAATGGGACAGAAAAATGTGCTGGCTATA GACCCTGGTTTCCGTACAGGTTGTAAAGTGGTATGTTTGGATAAGCAGGGCAAATTATTGGAAAATGCAACCATATATCC ACATACCGGACAGGGGAATGTTAAAAAAGCGGGCGACAAGATTAAGGAGCTTTGTGCCAAATATGAAATTGAGGCTGTTG CTATCGGCAATGGTACCGCGGGCCGCGAAACAGAAGTGTTTGTACGTGCGCTGAATATTCCGGGCATCGTAGTTGTGATG GTGAGTGAAAACGGGGCCTCCATTTATTCCGCTTCGGAAGTGGCGCGTGAAGAATTCCCTACACAGGACATTACGGTCAG AGGTGCTGTTTCCATTGGCCGCAGGTTAATGGACCCGCTGGCCGAGCTGGTAAAAATAGACCCTAAATCGATAGGTGTAG GGCAGTACCAGCATGATGTAGACCAGAACAAACTGCAGGCCTCACTGGATGATACGGTGATGAGTTGTGTAAATGCTGTA GGTGTGGAATTGAATACGGCCTCTAAACAGGTGCTTGCCTATGTTTCAGGCTTGGGTCCGCAGCTGGCACAAAATATTGT GGCTTACCGCAATGAGCACGGTGCATTCAAAAACCGTGAAAGTTTGAAGAAAGTTCCCCGTTTGGGTGATAAAGCTTTTG AACAGGCGGCAGGATTTTTAAGGATCAGGAATGCAGAAGCCGTATTGGATTCCAGCGGTGTACACCCGGAACGTTATGCA TTGGTCCATAAAATGGCCAGAGACCTGAACTGCAGCATTAATCAGCTGGTAAAAGATCCGTCTTTACAGCAGCAGATTAA GCTACAGCAATATGTAAGTGACGATATTGGCTTACCAACCCTGAACGACATCATGAGCGAATTGGCTAAGCCAGGGAGAG ATCCGCGTGAACAGTTCGAGGTGTTTAGTTTTACGGAAGGGGTAAATGAAATTTCCGACCTGAAAGTGGGTATGAAATTG CCGGGTATTGTTACCAATATTACCAATTTTGGTGCTTTTGTAGACATCGGTGTACACCAGGACGGCCTGGTGCATACCAG CCAGATCTCGGACAAGTTTGTGGCCAATGCCGCAGATGTGGTTAAGGTACATCAGAAGGTAGAGGTGACCGTGGTTGAAG TTGATGTGGCCCGTAAAAGGATTTCTCTGTCTATGAAAAAAGAAGTTGGCGCAAAACCTAAAAGCGAACAGCATAAGCAG GCTGATAAGGCTAAAAAGTTTGTGAAGACTAATGGATCTGCCCAACATAAAAAGCCAATAAAGCCGCAACACAGTCATAA AGGGGGGCAAAAAGAAAAGCCGCTGCCCGATGGTGACCTGCAGATGAAATTAGCGGCGTTGAAAAATATGTTTAAAACTG AAAAATAA Protein sequence : MSNHSKIIAAELAVTEKQVIATIELLDEGATVPFISRYRKEVTGSLDEVQVAGIRDRFQQLRELDKRREAILKALTALDK LTPELEAQINAATNIAAIEDIYLPYKPKRKTRASEARKKGLEPLALFILEQAKTDPEIEAGKFLNDELGVGSLEDALAGA RDIIAELVNENAEARTAMRNYFQQKAVFKSAVIKGKEEEGIKYKDYFDWQEPLKNAPSHRVLAIRRGENEAILKLEAMPE EDGAIRILESQFVKGNNACADQVKLAIQDSYKRLLGPSMETEIRNLSKEKADEEAIRVFAENARQLLLAAPMGQKNVLAI DPGFRTGCKVVCLDKQGKLLENATIYPHTGQGNVKKAGDKIKELCAKYEIEAVAIGNGTAGRETEVFVRALNIPGIVVVM VSENGASIYSASEVAREEFPTQDITVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNKLQASLDDTVMSCVNAV GVELNTASKQVLAYVSGLGPQLAQNIVAYRNEHGAFKNRESLKKVPRLGDKAFEQAAGFLRIRNAEAVLDSSGVHPERYA LVHKMARDLNCSINQLVKDPSLQQQIKLQQYVSDDIGLPTLNDIMSELAKPGRDPREQFEVFSFTEGVNEISDLKVGMKL PGIVTNITNFGAFVDIGVHQDGLVHTSQISDKFVANAADVVKVHQKVEVTVVEVDVARKRISLSMKKEVGAKPKSEQHKQ ADKAKKFVKTNGSAQHKKPIKPQHSHKGGQKEKPLPDGDLQMKLAALKNMFKTEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-147 | 48 |
