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Name : Phep_3952 (Phep_3952) Accession : YP_003094205.1 Strain : Pedobacter heparinus DSM 2366 Genome accession: NC_013061 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 4753073 - 4754347 bp Length : 1275 bp Strand : + Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; TIGRFAM: nucleotide sugar dehydrogenase DNA sequence : ATGTCAGCAGCAAATAAGCCACATATTGCAATTATCGGATTAGGCTATGTAGGGCTACCCCTGGCCATTGAATTTGCCAA ACAGTACCAGGTATTGGGCTTTGATATTGATGAAGAAAGAATAAAAGACCTTACTGCAAACATAGACCGCACCAAAGAGG CAGACCTGAACGCACTACAAAATGTACTTGGTAAAGGTCTTACCCTATCCTCCAATCAATCCTTATTAGAAGACTGCAAT GTTTACATCGTAACGGTACCTACCCCTATTGATCAGTTTAAGGCGCCCGACTTAAAACCCTTGCTTAGTGCTTCTAAAAT GCTGGCAAAGTACCTGTTAAAAGGAGATGTGGTCATTTATGAATCTACCGTTTACCCGGGCTGTACCGAAGAGGATTGCG TACCCATCCTGGAAAAACACTCCGGTTTAAAATACAATAGCGATTTTTATTGCGGCTATTCCCCGGAAAGGATCAACCCT GGCGACAAAGTAAACACGCTTACCAAAATCATCAAGGTTACTTCTGGTTCTACTCCCGAAGTGGCCGACTGGATTGACGG ACTATACGCCAGCATCATTACCGCAGGTACCCACAAAGCCCCAAGCATAAAAGTTGCTGAGGCCTCAAAAGCCATAGAAA ATGCCCAGCGGGATGTAAATATCTCCTTTGTGAACGAACTGGCACTTATATTCGATAAGCTGGATATTGATACTGCAGAC GTGATTGCAGCTGCAGGAACAAAATGGAATTTCCTGAAATATAAGCCTGGCCTGGTGGGTGGGCACTGCATTGGGGTCGA TCCCTATTACCTGGCACATAAATCCAATGCACTTGGTTACACCCCTCAGGTCATCCTGTCGGGCAGAAGGGTGAACGAAA ACATGGGTATTTTTGTGGCCAGTAAGGTGGTTAAAATGATGATTGCCAAAGGATCTGCTGTAAAAGGAGAAAAAGCCCTC ATTCTGGGTTTCGCATTTAAAGAAAACTGTCCGGACATCAGGAACACCAGGGTTATCGATATTTATACAGAGTTGCAGCA ATTTGGTATGGAAGTAGATGTTTATGATCCATGGGCAAATGCAGATGAAGTAGCGCAGGAATATAACATTACATTAAGCC CAGACCTGGCAAACCAGGAATATAAAGCAATCATCATTGCCGTTGCCCATAATGAGTTTTTGAGCATCGATTACCAGAAA TACAAACAAGCGGGCGCAATCATTTTTGATACCAAATCATTTATCGACCGCAAGTTTGCAGATGCAAGATTGTAA Protein sequence : MSAANKPHIAIIGLGYVGLPLAIEFAKQYQVLGFDIDEERIKDLTANIDRTKEADLNALQNVLGKGLTLSSNQSLLEDCN VYIVTVPTPIDQFKAPDLKPLLSASKMLAKYLLKGDVVIYESTVYPGCTEEDCVPILEKHSGLKYNSDFYCGYSPERINP GDKVNTLTKIIKVTSGSTPEVADWIDGLYASIITAGTHKAPSIKVAEASKAIENAQRDVNISFVNELALIFDKLDIDTAD VIAAAGTKWNFLKYKPGLVGGHCIGVDPYYLAHKSNALGYTPQVILSGRRVNENMGIFVASKVVKMMIAKGSAVKGEKAL ILGFAFKENCPDIRNTRVIDIYTELQQFGMEVDVYDPWANADEVAQEYNITLSPDLANQEYKAIIIAVAHNEFLSIDYQK YKQAGAIIFDTKSFIDRKFADARL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-114 | 54 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-114 | 54 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-101 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Phep_3952 | YP_003094205.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 1e-114 | 54 |
