|
Name : Phep_3394 (Phep_3394) Accession : YP_003093650.1 Strain : Pedobacter heparinus DSM 2366 Genome accession: NC_013061 Putative virulence/resistance : Resistance Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 4037359 - 4038585 bp Length : 1227 bp Strand : + Note : PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein DNA sequence : ATGCATACATCCAAAAAAGCCGCCATCAGCTTTATATTCATTACATTACTGATTGACGTAATGGGATGGGGATTGATTAT CCCTGTAATGGCAGATCTTATTGCCCAGCTAAAAGGCATTTCAATTAATCAGGCCAGTACTTATGGTGCCCTGTTGCTTT CTGTTTTCGCCGTTACACAATTCCTTTTCTCGCCTGTAATGGGCAACCTGAGCGATAGGTATGGCCGCCGTCCGATTTTG TTATTTTCTTTACTAGGCTTCGGGATCGATTACATTATCCTGGCCCTGGCCCCCACTTATGGATGGCTATTTTTAGGTCG CATTATAGCCGGGATTACCGGTGCCAGCTTTACCACGGCTACAGCTTACATTGCCGATGTCAGTACAGATGAAACTTCTA AGGCCAAGAATTTCGGTCTGATAGGTGCTGCCTTTGGTCTGGGTTTTGTACTTGGCCCGGCCCTTGGTGCTTTTTTAGCT ACCTGGGGTATCAGGGCTCCTTTTTATGCAGCCGCGGCACTTTGTTTGCTCAACTGTATCTATGGTTATTTTTTCCTGCC CGAATCCTTAAGTAAAGAACACCGCAGGGAATTTGACTGGAAACGCGCCAACCCTTTTGGTTCTTTAAAATTTTTAACCA ATAATCCAAAAATCGGTAGCCTGGCCCTGGGCTTTTTCCTGATCTACCTGGGCAGCCAGGCCGTACAGAGCAACTGGAAT TTTTTCACCATTTACCGCTTCAACTGGAGCGAAAAAATGGTAGGCATTTCACTTGCAGTTGTAGGTGTGATGGTTGGTGC CGTTCAGGGGGGGCTTACCAGGATTGTTGTTCCTAAGATCGGGAATGAAAAGAGCATTTACCTGGGTCTATCGCTTTACA CCTTAGGACTGGTCCTTTTCGCTTTTGCTACCCAGGGCTGGATGATGTTTGCCTTCCTGGTACCTTATTGTTTAGGTGGC ATATGTGGCCCCTCACTGCAATCTGCCATTTCAGGACATGCGCCCGCTAACCAGCAGGGAGAGCTACAGGGTGCATTAAC CAGTTTGATGAGCCTTACAGCCATCATTGGCCCGCTGATCATGAACAATTCATTTGCTTATTTTACAAGCAGTAAAGCAC CGTTTTACTTTCCAGGTATCCATTTCTTAATTGGGGGTGTTTGCATGCTGATCAGTATCTTTATCACTTATAAAGTATTG AGCAGGGAAAGAAATCCTCAGGTATAG Protein sequence : MHTSKKAAISFIFITLLIDVMGWGLIIPVMADLIAQLKGISINQASTYGALLLSVFAVTQFLFSPVMGNLSDRYGRRPIL LFSLLGFGIDYIILALAPTYGWLFLGRIIAGITGASFTTATAYIADVSTDETSKAKNFGLIGAAFGLGFVLGPALGAFLA TWGIRAPFYAAAALCLLNCIYGYFFLPESLSKEHRREFDWKRANPFGSLKFLTNNPKIGSLALGFFLIYLGSQAVQSNWN FFTIYRFNWSEKMVGISLAVVGVMVGAVQGGLTRIVVPKIGNEKSIYLGLSLYTLGLVLFAFATQGWMMFAFLVPYCLGG ICGPSLQSAISGHAPANQQGELQGALTSLMSLTAIIGPLIMNNSFAYFTSSKAPFYFPGIHFLIGGVCMLISIFITYKVL SRERNPQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 1e-33 | 42 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 1e-33 | 42 |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 1e-33 | 42 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 1e-33 | 42 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-38 | 42 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-38 | 42 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 1e-38 | 42 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-38 | 42 |
| tetA | CAJ77034.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 1e-34 | 41 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 9e-39 | 41 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 1e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Phep_3394 | YP_003093650.1 | major facilitator superfamily protein | Y19114.gene.p01 | Protein | 1e-39 | 43 |
| Phep_3394 | YP_003093650.1 | major facilitator superfamily protein | AY264780.2.gene3.p01 | Protein | 3e-47 | 42 |
| Phep_3394 | YP_003093650.1 | major facilitator superfamily protein | X75761.gene.p01 | Protein | 3e-39 | 42 |
| Phep_3394 | YP_003093650.1 | major facilitator superfamily protein | NC_011586.7045189.p0 | Protein | 7e-37 | 42 |
| Phep_3394 | YP_003093650.1 | major facilitator superfamily protein | NC_010410.6002612.p0 | Protein | 8e-35 | 41 |
| Phep_3394 | YP_003093650.1 | major facilitator superfamily protein | AF133140.gene.p01 | Protein | 8e-35 | 41 |
| Phep_3394 | YP_003093650.1 | major facilitator superfamily protein | CP001485.1.gene2821. | Protein | 5e-39 | 41 |
| Phep_3394 | YP_003093650.1 | major facilitator superfamily protein | AF534183.gene.p01 | Protein | 4e-39 | 41 |
| Phep_3394 | YP_003093650.1 | major facilitator superfamily protein | NC_010410.6002597.p0 | Protein | 5e-39 | 41 |
