Gene Information

Name : Phep_3147 (Phep_3147)
Accession : YP_003093404.1
Strain : Pedobacter heparinus DSM 2366
Genome accession: NC_013061
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase, low molecular weight
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : 1.20.4.1
Position : 3753952 - 3754371 bp
Length : 420 bp
Strand : -
Note : PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin)

DNA sequence : 
ATGAAAAGAGTACTCGTATTATGTACCGGCAACAGTTGCCGCAGTCAGATTGCAGAAGGATATCTGAGGCACTTCGCAGG
TGATGCCGCCGAGATCTACAGCGCAGGAATCGAAACACATGGCGTAAACCCAAAGGCCATCGAAATTATGAAAAGAGACG
GTATTGATATATCCGGCCATACTTCCAACAATGTGAATGAATACACAGGAATAGAGTTTGACTATGTGATCACCGTTTGT
GACAATGCAAAAGAAAGCTGCCCTTACTTCCCAACCAATGCTGTTAAGCTGCACTACAATTTTCCTGACCCGGCAAAAGC
CAAAGGAAACGACGAGGAAGTTATGGAACAGTTTAGGGAAGTTCGCGAAATGATCCGAAAGTATGCCCAGAACTTTGTTA
ACGAAAACCTGAAGAACTAA

Protein sequence : 
MKRVLVLCTGNSCRSQIAEGYLRHFAGDAAEIYSAGIETHGVNPKAIEIMKRDGIDISGHTSNNVNEYTGIEFDYVITVC
DNAKESCPYFPTNAVKLHYNFPDPAKAKGNDEEVMEQFREVREMIRKYAQNFVNENLKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 3e-21 48
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-21 48
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 3e-22 47
BCAM0234 YP_002232865.1 putative arsenate reductase Not tested BcenGI11 Protein 2e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Phep_3147 YP_003093404.1 protein-tyrosine phosphatase, low molecular weight BAC0580 Protein 1e-22 48
Phep_3147 YP_003093404.1 protein-tyrosine phosphatase, low molecular weight BAC0032 Protein 5e-22 47
Phep_3147 YP_003093404.1 protein-tyrosine phosphatase, low molecular weight BAC0581 Protein 4e-23 45