Gene Information

Name : Phep_3146 (Phep_3146)
Accession : YP_003093403.1
Strain : Pedobacter heparinus DSM 2366
Genome accession: NC_013061
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 3752886 - 3753950 bp
Length : 1065 bp
Strand : -
Note : PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein

DNA sequence :
ATGTCACTGAATCACTGCGCTCCGGCAAATCAGCGCAAGAAGCTAAGCTTTTTGGATCGTTATCTCACACTATGGATATT
CCTGGCGATGGCTGCCGGTGTCGGTATCGGTTACTTTGTACCGTCCTCCGCAGGATTCATTAACTCATTTTCGAGCGGCA
CGACCAACGTGCCGCTTGCTATTGGCCTGATACTGATGATGTACCCGCCACTTGCCAAAGTTCGGTATGAAAAGATGGGT
GAAGTCTTTCGCAATACTAAAGTGCTGGGTACTTCTCTTTTCCTGAACTGGGTTGTTGGGCCGGTGCTGATGTTTATTCT
GGCAGTTACTTTTCTGCACAATTACCCAGAATATATGATTGGGCTGATCTTGATTGGCCTTGCCCGTTGTATTGCGATGG
TAGTTGTTTGGAATGAACTTGCCGAAGGCAATAGAGAGTATGCCGCCGGGCTTATTGCCTTGAACAGCATCTTCCAGGTA
TTGCTCTATAGCGTTTATGCCTATCTTTTTATAACTGTATTGCCACCGATGTTTGGCATCAAGGGACTGGAGGTAAACAT
TACCATTGGAGAGATTGCTAAAAGTGTCGGTCTGTATCTTGGTGTTCCTTTTGCGGCTGGCGTAGTCAGCAGGTTCGCTT
TAATCAAACTCAAAGGTGAGAGCTGGTTCCAGCAGAAGTTTATTCCCTTCGTTTCCCCAATCACCCTGATTGCATTGCTC
TTTACCATTGTGGTCATGTTCAGCCTGAAAGGTGAGCTTATTGTGCAAATACCAATGGATGTAGTGCGGATTGCAATACC
TCTGGTAATCTATTTTGCGCTGATGTTCCTTATCAGCTTTTTTGCAGGAGAGAAAATGGGTGCCGATTACTCCCAAAGTG
CTTCGATTGCCTTTACCGCTGCCGGTAATAACTTTGAACTGGCGATTGCGGTCGCTATCGGCGTGTTCGGAATCAACTCA
GGTCAGGCATTCGTAGGAGTCATCGGCCCACTGGTAGAAGTACCAGCGTTGATTGCACTCGTTAATCTCGCATTCTGGTT
CCGCAAAAAATACTTTTCAAACTGA

Protein sequence :
MSLNHCAPANQRKKLSFLDRYLTLWIFLAMAAGVGIGYFVPSSAGFINSFSSGTTNVPLAIGLILMMYPPLAKVRYEKMG
EVFRNTKVLGTSLFLNWVVGPVLMFILAVTFLHNYPEYMIGLILIGLARCIAMVVVWNELAEGNREYAAGLIALNSIFQV
LLYSVYAYLFITVLPPMFGIKGLEVNITIGEIAKSVGLYLGVPFAAGVVSRFALIKLKGESWFQQKFIPFVSPITLIALL
FTIVVMFSLKGELIVQIPMDVVRIAIPLVIYFALMFLISFFAGEKMGADYSQSASIAFTAAGNNFELAIAVAIGVFGINS
GQAFVGVIGPLVEVPALIALVNLAFWFRKKYFSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 3e-79 60
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 9e-100 60
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 7e-100 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Phep_3146 YP_003093403.1 arsenical-resistance protein BAC0573 Protein 5e-112 66
Phep_3146 YP_003093403.1 arsenical-resistance protein BAC0004 Protein 1e-77 50