Gene Information

Name : Phep_3128 (Phep_3128)
Accession : YP_003093386.1
Strain : Pedobacter heparinus DSM 2366
Genome accession: NC_013061
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3736174 - 3736920 bp
Length : 747 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAGTGGCAAGATCCTGGAAATACACGATGTAAAACGCGAGTTTATTATGGGGACTGAAACCGTCAGGGCTTTAAAAGG
AGTTTCTTTTGATGTGGATTCGGGTGAGTTTTTAACCATCATGGGCAGCAGCGGATCGGGCAAAACCACTTTATTAAATA
TGCTGGGTTGCCTGGACAAGCCAACAGAAGGCACTTACCTGCTGGATGGGGTAAATGTGAAGGAACTGAGCAGAGATGAA
CTGGCCAAATTAAGGAACCATAAGATTGGGTTTGTGTTTCAGGCCTATAACTTACTGCCCCGCACCTCGGCCCTTGAAAA
TGTGGAACTTCCGCTGTTGTATAATCCTGAAATTGGGAATAAAGAGCGCAAAGAAAGGGCAATTGCTGCATTACAGGCTG
TGAAACTGGATGGTAGGTTTGACCATATGCCCAACCAGCTGTCGGGCGGGCAACAACAGCGTGTGGCCATTGCCAGGGCC
CTGGTCAATGAACCAGTGATGATTCTTGCAGATGAGGCCACAGGTAACCTGGATACCCGTACATCCTACGAGATCATGTC
ACTGATGCAGGAACTGAACCAGAATGGCAAGACCATTGTATTTGTTACCCATGAGCCAGATATTGCTGCTTTCAGCAGCA
GGACCGTAATGCTAAAGGACGGCAGGGTACAAAAAGATTCCATCAATAACAACACCAGACTGGCAAAGGATGCACTTGCA
GCTCTCCCTCAAACAGACGATTATTAA

Protein sequence : 
MSGKILEIHDVKREFIMGTETVRALKGVSFDVDSGEFLTIMGSSGSGKTTLLNMLGCLDKPTEGTYLLDGVNVKELSRDE
LAKLRNHKIGFVFQAYNLLPRTSALENVELPLLYNPEIGNKERKERAIAALQAVKLDGRFDHMPNQLSGGQQQRVAIARA
LVNEPVMILADEATGNLDTRTSYEIMSLMQELNQNGKTIVFVTHEPDIAAFSSRTVMLKDGRVQKDSINNNTRLAKDALA
ALPQTDDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Phep_3128 YP_003093386.1 ABC transporter NC_012469.1.7686878. Protein 5e-54 48
Phep_3128 YP_003093386.1 ABC transporter NC_008702.1.4606598. Protein 5e-46 47
Phep_3128 YP_003093386.1 ABC transporter CP001581.1.gene798.p Protein 4e-38 43
Phep_3128 YP_003093386.1 ABC transporter CP001581.1.gene598.p Protein 3e-42 42