|
Name : Phep_1631 (Phep_1631) Accession : YP_003091906.1 Strain : Pedobacter heparinus DSM 2366 Genome accession: NC_013061 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1932111 - 1933847 bp Length : 1737 bp Strand : - Note : PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK DNA sequence : ATGCCGGTAAATCACTACCTTGGTTCTCAGATGCTAAACGTTAAAAATCTAGACATACAATTTCTTAACAGAGAGGACAA ATCCTGGTTTAAGGCCGTAAACAAGGTAAGCTTCCAGGTTGAAAAAGGAAAAGTACTGGGCATAGTCGGCGAATCAGGCT CCGGTAAATCCGTAACTTCTTTTTCTATTATGCGACTTCATGATCCTCAAAGTACAAAAATTGAGGGCAACATTGATTTT CAAAACATCAACCTGCTCGGCCTGTCGCCCGATGAGATCAGGAAATACAGGGGTAATAAAATTGCCATGATCTTTCAGGA ACCCATGACTTCCCTGAACCCGGTTTTTACCTGTGGCTATCAGGTTAAAGAAGCCATCATGCTGCACCAGCGGGTAGATA AACAAACTGCAAAAGAGAAAACCATTGCCTTGTTTAAAGAAGTACAGCTGCCCAGACCGGAAAATATATTTGACAGTTAC CCGCACCAGCTTTCAGGGGGACAAAAACAAAGGGTAATGATTGCCATGGCTCTGAGCTGCAACCCCGAACTGCTGATTGC CGATGAGCCAACTACGGCATTGGATGTTACCGTACAGAAAACCATTTTGCAATTGCTGCTGAAGCTGAAAGAAGAGCGCG GAATGGCCATGATCTTTATCTCGCACGACCTGGCAGTGATCAGTGAGATTGCGGACGAGGTAGCCGTAATGTACAAAGGA CAAATTGTGGAACAGGGAGCGGCAGCGCAGCTGTTTAACCATCCGCAACACCCTTATACCAGGGGCTTACTGGCCTGCCG CCCCGCCCCTCAGCGCCTGCTGAAAAAACTTCCGGTAGTGGCCGATTTTATGAACGGCGACAAAGAAATGGGCCTGAAGC ATTTACTGGAAATGAACAGTTATACACAGGCCGAAATTGAACAGCGCAGGCATAACCTTTATCAGCAAAAACCCTTGCTG CAGGTGAAACAATTGTGTACCTGGTATCCGATAAACAAGGGGCTTTTTGGCAAAACAACGGAATATGTAAAAGCTGTGGA CGACATTACTTTTGATGTGTTTCCAGGCGAGACCTTAGGACTGGTTGGCGAATCCGGATGCGGAAAGACCACGCTGGGCC GTAGTATTTTACGATTGGTGGAGCCCACTTCAGGCGAGCTGCTGTTTGACGGGACCGACTTATCCTCGCTGGATACTGCC GGATTAAGAAAAATGAGAAGAGCGGTACAGATCATCTTTCAGGACCCCTACTCTTCCCTCAATCCGCGTTTAACCATCGG TAATGCGCTGATGGAACCCTTACAGGTGCATGGCATGTTCGACAACAATGAGCAGCGGAAAGCCCATGTGCTGAATCTAT TGGACCGGGTAGATCTGAAACCTGAATATTTCAACAGGTATCCGCACGAATTTTCGGGCGGACAGCGCCAACGCATAGTC ATTGCAAGGGCCCTGGCCCTACAGCCCCGGTTTATTATATGCGATGAATCGGTATCGGCACTGGATGTTTCTGTACAGGC CCAGGTGCTCAATCTGCTCAGAGAATTGCAGCAGGAGTTTGGGCTTACCTATATCTTTATCTCACACGACCTGGCCGTGG TAAAGCACATCTCCGACAGGATGATTGTGATGAACAAAGGCAAAATTGAAGAACAGGGCTTTCCGGAAGAAATTTACCAT AACCCTAAAGCTGAATACACCAAAAAACTAATTGCAGCTATACCCGGGCATGCTTAA Protein sequence : MPVNHYLGSQMLNVKNLDIQFLNREDKSWFKAVNKVSFQVEKGKVLGIVGESGSGKSVTSFSIMRLHDPQSTKIEGNIDF QNINLLGLSPDEIRKYRGNKIAMIFQEPMTSLNPVFTCGYQVKEAIMLHQRVDKQTAKEKTIALFKEVQLPRPENIFDSY PHQLSGGQKQRVMIAMALSCNPELLIADEPTTALDVTVQKTILQLLLKLKEERGMAMIFISHDLAVISEIADEVAVMYKG QIVEQGAAAQLFNHPQHPYTRGLLACRPAPQRLLKKLPVVADFMNGDKEMGLKHLLEMNSYTQAEIEQRRHNLYQQKPLL QVKQLCTWYPINKGLFGKTTEYVKAVDDITFDVFPGETLGLVGESGCGKTTLGRSILRLVEPTSGELLFDGTDLSSLDTA GLRKMRRAVQIIFQDPYSSLNPRLTIGNALMEPLQVHGMFDNNEQRKAHVLNLLDRVDLKPEYFNRYPHEFSGGQRQRIV IARALALQPRFIICDESVSALDVSVQAQVLNLLRELQQEFGLTYIFISHDLAVVKHISDRMIVMNKGKIEEQGFPEEIYH NPKAEYTKKLIAAIPGHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-95 | 41 |
