|
Name : Phep_1604 (Phep_1604) Accession : YP_003091879.1 Strain : Pedobacter heparinus DSM 2366 Genome accession: NC_013061 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 1899723 - 1901051 bp Length : 1329 bp Strand : - Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGACAAAACTTACTGCAGACAACGAATATTTCAAAGGGATCGGACAGATCAGCTTTGAAGGACAGGAAACAGACAACCC GCTGGCTTTCAGATGGTACAATCCTGAACAGGTGGTTGCCGGCAAAAAGATGAAAGAGCACCTGCGTTTTGCCGGTGCTT ACTGGCATTCTTTCTGCGGAAATGGTACAGATCCCTTTGGCGGTCCGACACATATTTTTCCCTGGGACGCGAAAGCGGAT GTACTGGATCGTGCAAAGGACAAAATGGATGCAGCCTTTGAATTTCTGACCAAAATGAACCTGCCCTATTACTGCTTTCA TGATGTGGATGTGGTAGATTATGGCAACGACATCAAAGAAAATGAAAGACGGATGCAGATCATGACCGATTATGCAAAAG CCAAACAGGCAGAAACAGGTGTAAAATTGCTTTGGGGTACGGCTAATCTTTTCTCTCACCGCAGGTATATGAACGGAGCG GCTACCAATCCCGACTTTCATGTGCTGAGCCATGGCGCAGCACAGGTAAAAGCAGCCCTTGATGCCACCATAGCCCTTAA TGGGGAAAATTATGTATTCTGGGGTGGCCGCGAAGGTTACATGAGCCTCCTGAACACCAATATGAAACGCGAACAGGAAC ATCTGGCAAAATTTCTGCATACAGCCAAAGATTATGCCCGTAAAAATGGTTTCAAAGGCACCTTCTTTATTGAGCCCAAA CCTTGTGAACCCACCAAGCACCAGTACGATTACGATGCAGCAACCGTACTTGGCTTTCTCCGTCAGTACGACCTGCTGGG TGATTTTAAACTGAACCTGGAAGTTAACCATGCTACGCTGGCCGGACATACCTTCCAGCATGAGCTGCAGGTGGCTGCTG ATGCCGGAATGCTGGGCTCTATTGATGCCAACCGCGGCGACGAACAAAATGGCTGGGATACAGACCAGTTTCCAAACAAC ATCAATGAGGTTACAGAATCCATGCTGATCATCCTGGAAGCAGGGGGCCTGCAAGGTGGGGGTATAAATTTCGATGCCAA GATCCGCAGGAATTCAACGGATCCGGCCGACCTTTTCCATGCACATATTGGTGGAATGGATATTTTCGCCCGGGCCCTGA TTACCGCCGACCGCATCCTTCAGCATTCTGAATACAAAAAAATAAGGGCAGAAAGATATGCGTCTTACGACAGTGGAAAA GGCAAAGCCTTTGAAGAAGGGAGCTTAAGCCTGGAAGACCTGCGCGATTATGCAGTGGCACAGGGCGAACCGCAAACCAT CAGCGGCAAACAGGAATTCCTGGAAAACCTGATCAACAGGTATATTTAA Protein sequence : MTKLTADNEYFKGIGQISFEGQETDNPLAFRWYNPEQVVAGKKMKEHLRFAGAYWHSFCGNGTDPFGGPTHIFPWDAKAD VLDRAKDKMDAAFEFLTKMNLPYYCFHDVDVVDYGNDIKENERRMQIMTDYAKAKQAETGVKLLWGTANLFSHRRYMNGA ATNPDFHVLSHGAAQVKAALDATIALNGENYVFWGGREGYMSLLNTNMKREQEHLAKFLHTAKDYARKNGFKGTFFIEPK PCEPTKHQYDYDAATVLGFLRQYDLLGDFKLNLEVNHATLAGHTFQHELQVAADAGMLGSIDANRGDEQNGWDTDQFPNN INEVTESMLIILEAGGLQGGGINFDAKIRRNSTDPADLFHAHIGGMDIFARALITADRILQHSEYKKIRAERYASYDSGK GKAFEEGSLSLEDLRDYAVAQGEPQTISGKQEFLENLINRYI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 5e-102 | 51 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 4e-102 | 51 |
