Gene Information

Name : Phep_1598 (Phep_1598)
Accession : YP_003091873.1
Strain : Pedobacter heparinus DSM 2366
Genome accession: NC_013061
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1894143 - 1894829 bp
Length : 687 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCTGCCGAAAACATCCTTGAAGTTCAAAACGTAAGTAAAACCTATAAAAGTGCAGGTACTGCCCTTAGGGTACTCAG
CAATATTGATTTTTCTATACCCCGGGGCAGCACGGTAGCCATTACCGGCCCTTCAGGCAGTGGAAAAACAACCTTACTTG
GCCTTTGTGCGGGGCTCGACAGGGCAAGCGCCGGCAGCGTAATCTTAAACAAAGTGAAGCTGGACCAATTGAACGAAAAC
GAACTTGCCGCCATACGCAATAACCATGTAGGCTTCATTTTTCAGAATTTCCAGCTGATGCCCACCCTTACGGCACTCGA
AAACGTAATGGTGCCCATGGAACTGAGAAGAGAGAAAAATGTGACGCAGCGGGCCATGGAGCTACTGGCCAAGGTAGGCC
TGTCAGACCGTGCCCAACATTATCCCATACAGCTTTCCGGTGGTGAACAGCAACGTGTTTCCCTGGCCAGGGCTTTCTCC
AATAAACCCGACATTTTGTTTGCCGATGAACCTACCGGAAATTTAGATGGAGAAACCAGTGAAAAAATACAACAGCTGCT
GTTTGAACTGAACCGGGAAGCGGGTACTACCCTGATCATCGTAACGCACGACCTTGAACTGGCTGCCCATACCAGCCGGA
TCATTAAGCTAAAAGCCGGGACCATTCAATCTGATCTGTATGTCTGA

Protein sequence : 
MSAENILEVQNVSKTYKSAGTALRVLSNIDFSIPRGSTVAITGPSGSGKTTLLGLCAGLDRASAGSVILNKVKLDQLNEN
ELAAIRNNHVGFIFQNFQLMPTLTALENVMVPMELRREKNVTQRAMELLAKVGLSDRAQHYPIQLSGGEQQRVSLARAFS
NKPDILFADEPTGNLDGETSEKIQQLLFELNREAGTTLIIVTHDLELAAHTSRIIKLKAGTIQSDLYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Phep_1598 YP_003091873.1 ABC transporter NC_012469.1.7686878. Protein 7e-41 43
Phep_1598 YP_003091873.1 ABC transporter NC_008702.1.4606598. Protein 2e-31 41