Gene Information

Name : Phep_0130 (Phep_0130)
Accession : YP_003090418.1
Strain : Pedobacter heparinus DSM 2366
Genome accession: NC_013061
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 155866 - 156294 bp
Length : 429 bp
Strand : +
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGTCAGGTATTAACAAAGTTATTTTAGTCGGGCATTTAGGAAAAGATCCTGAAGTCAGACATTTGGACGGGGGGGTAAC
TGTAGCAAGTTTCCCACTGGCAACATCAGAGACCTATAACAAAGATGGCAAGCGCATAGAGCAAACAGAATGGCACAACA
TTGTTTTATGGAGGGGCCTGGCAGAAGTTGCCTCTAAATATTTGCAAAAAGGCAAGCTGGTTTATATTGAGGGTAAACTG
CGTACCCGATCTTTTGAAGACCGGGAAAAAATAAAGAAATACGTTACAGAAGTTGTAGCCGAAAACTTTACCATCCTGGG
CAGGAAAAGTGATTTTGAACAAACACCGGTCAGCAGTGAGGGCACAACACCTAAAAGTGAAAGTGAGTATACCGATCTTA
CTGACCCATCCGGAGATTTACCTTTCTAA

Protein sequence :
MSGINKVILVGHLGKDPEVRHLDGGVTVASFPLATSETYNKDGKRIEQTEWHNIVLWRGLAEVASKYLQKGKLVYIEGKL
RTRSFEDREKIKKYVTEVVAENFTILGRKSDFEQTPVSSEGTTPKSESEYTDLTDPSGDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 3e-20 48
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-17 43