Name : Phep_1132 (Phep_1132) Accession : YP_003091412.1 Strain : Pedobacter heparinus DSM 2366 Genome accession: NC_013061 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1326138 - 1328678 bp Length : 2541 bp Strand : + Note : PFAM: ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain DNA sequence : ATGGAAGCTAAATTTTCTCCACAAGTAAAAGACGTGATATCTTTTAGCAGGGAAGAAGCCCTGAGATTAGGTCACGATTA CATAGGCGCAGAACATCTTTTGTTAGGCCTTATTCGCGAAGGCGATGGTATGGCCATTAAGATATTAAAATCACTAGGTG TTGATACTTCAAAACTTCGTCGCTCGATTGAGGATTCGGTTAGGGGTACGTCGAGTGTAACGGTTAACCTGGGAAACATC CCCTTAACCAAACAAGCAGAAAAAGTTTTAAAGATCACTTATCTGGAAGCAAAGATCTTCAAAAGCGATTTGATAGGTAC AGAACACCTGTTGCTTTCTATTCTTCGCGATGATGATAACATTGCCTCACAGATTTTATTACAGTTTAACATCAATTACG AGATATTTAAACAGGAGGTTGAAGTGAACAAGAACGGTTTTAGAGACGAAACGCAGAACAGTGCATCAACAGGTGGAGAT GATGACTACCGCGAAGAAGAATCATTCAGCAGCCCTAAAAAGGTGTCGGACATTAAATCTAAAACCCCGGTTCTGGATAA TTTTGGAAGAGACCTGACCAAGGCAGCGGAAGAGGGCCGTTTGGATCCTATTGTTGGCCGTGAGAAAGAAATTGAACGCG TGTCGCAGATATTATCACGACGTAAAAAGAACAATCCGATCCTGATTGGTGAACCTGGTGTAGGTAAATCTGCTATTGCA GAAGGTCTGGCCCTCCGTATTGTTCAACGTAAAGTTTCCAGGGTACTGTTCAATAAACGTGTGGTAACATTAGACCTGGC TTCATTAGTTGCCGGCACAAAATACCGCGGACAGTTTGAAGAGCGTATGAAGGCGGTGATGAATGAGCTGGAAAAATCTA CCGATGTGATCCTGTTTATTGATGAGATCCATACAATTGTAGGCGCAGGTGGTGCTTCAGGTTCTTTAGATGCATCAAAT ATGTTCAAACCAGCTTTGGCCAGGGGCGAAATTCAATGCATTGGGGCAACTACGCTGGATGAATACCGTCAGTATATAGA AAAGGATGGGGCTTTGGACCGTCGTTTCCAGAAGGTAATGATCGAGCCGGCTTCACCTGATGAAACCATAGAAATTCTGA ACCGTATCAAAGAAAAATATGAAGATCACCACGGTGTGACCTATACAGATGAGGCGATTGCTGCCTGTGTGGCGCTTACT TCAAGGTACATTACCGACAGGTTTTTGCCGGATAAGGCAATTGATGCTTTGGACGAGGCCGGATCAAGGGTGCATTTAAC AAACATACATGTTCCTGATAACATCATTGCGATTGAGAATAAGATTGAAGAGATCAAGGTTGAAAAAAATAAGGTTGTAA AAAGCCAGAAATATGAAGAGGCCGCCAAATTAAGAGATACTGAAAAAAATCTGTTGGAAGAGCTTGATCGTGCAAAGGCA GAATGGGAGGCTGAAACTAAAACGAAACGTTATACAGTTACAGAAGATAATGTTGCAGAGGTGGTTTCAATGATGACCGG CATTCCATTACAACGTGTTGGACAAACTGATAGTGTAAAGCTGTTAAATATGTACGATACTGTTGCGACCAAGATCATTG GACAGGATGATGCAATTAAAAAATTGACAAAAGCTATTCAGCGTACCAGAGCGGGATTAAAGGACCCTAAAAAACCGATC GGTTCGTTTATATTTCTTGGGCCTACCGGTGTTGGTAAGACTGAGCTTGCAAAGGAACTTGCACGTTTCATGTTTGACAG TGATGATTCACTGATCCAGATTGACATGAGTGAGTACATGGAGAAATTTGCTGTATCGCGTTTAGTAGGTGCGCCTCCGG GATACGTGGGGTATGAGGAAGGCGGACAGCTGACTGAAAAAGTACGCAGAAAACCGTATGCGGTAATTTTGCTGGATGAG ATTGAGAAAGCACACCCGGATGTGTTTAATATCCTGTTGCAGGTATTGGATGAGGGACAGCTTACGGATAGTCTTGGTCG TAAGGTTGACTTCAGAAATACCATCATTATTATGACCTCTAATATCGGGGCCCGTCAGCTGAAAGATTTTGGGCAGGGAG TAGGTTTTTCTACCGCTGCAAAAAGCAACCAGGCTGATGCACATTCGAGGGGAGTAATTGAAAATGCGTTGAAACGCGCT TTTGCCCCTGAGTTCCTGAACCGTGTAGATGATGTAGTAGTATTTAATTCACTGGGTAAAGAAGAGATCTTCAAGATCAT AGACATTGAGTTAAAATCGTTATTTGGTCGTGTACATAATTTAGGTTACGAGGTTAAGCTTACTGAGAAAGCAAAAGAAT TTATAGCCGATAAAGGGTTTGATTCTAATTTTGGTGCAAGACCGCTTAAACGTGCGATCCAGAAATATCTGGAAGATCCG ATCGCTGAAGAGATCCTTAAAGGAGAGATCCATGATGGAGATATTCTCGAAATCGATTACAACAAAGAAAGTAATGAAAT AGTTGTAGAGAATAGAAGTCCGGGTAAGAAAAAGAAAAAAGAAGAGGGAAGTGTAGAATAA Protein sequence : MEAKFSPQVKDVISFSREEALRLGHDYIGAEHLLLGLIREGDGMAIKILKSLGVDTSKLRRSIEDSVRGTSSVTVNLGNI PLTKQAEKVLKITYLEAKIFKSDLIGTEHLLLSILRDDDNIASQILLQFNINYEIFKQEVEVNKNGFRDETQNSASTGGD DDYREEESFSSPKKVSDIKSKTPVLDNFGRDLTKAAEEGRLDPIVGREKEIERVSQILSRRKKNNPILIGEPGVGKSAIA EGLALRIVQRKVSRVLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSTDVILFIDEIHTIVGAGGASGSLDASN MFKPALARGEIQCIGATTLDEYRQYIEKDGALDRRFQKVMIEPASPDETIEILNRIKEKYEDHHGVTYTDEAIAACVALT SRYITDRFLPDKAIDALDEAGSRVHLTNIHVPDNIIAIENKIEEIKVEKNKVVKSQKYEEAAKLRDTEKNLLEELDRAKA EWEAETKTKRYTVTEDNVAEVVSMMTGIPLQRVGQTDSVKLLNMYDTVATKIIGQDDAIKKLTKAIQRTRAGLKDPKKPI GSFIFLGPTGVGKTELAKELARFMFDSDDSLIQIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEKVRRKPYAVILLDE IEKAHPDVFNILLQVLDEGQLTDSLGRKVDFRNTIIIMTSNIGARQLKDFGQGVGFSTAAKSNQADAHSRGVIENALKRA FAPEFLNRVDDVVVFNSLGKEEIFKIIDIELKSLFGRVHNLGYEVKLTEKAKEFIADKGFDSNFGARPLKRAIQKYLEDP IAEEILKGEIHDGDILEIDYNKESNEIVVENRSPGKKKKKEEGSVE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 49 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Phep_1132 | YP_003091412.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 52 |
Phep_1132 | YP_003091412.1 | ATPase AAA | VFG0080 | Protein | 1e-143 | 51 |