Gene Information

Name : Dfer_0882 (Dfer_0882)
Accession : YP_003085302.1
Strain : Dyadobacter fermentans DSM 18053
Genome accession: NC_013037
Putative virulence/resistance : Unknown
Product : Integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1042209 - 1043030 bp
Length : 822 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: dvl:Dvul_2602 integrase catalytic subunit

DNA sequence :
TTGACAGAGGAGATTGTTCGCGAGCACGATATCGCTGTGAGCAGAGCCTGTAAAATCGTTAGCCTTGTTCGCTCTCAATA
TTATTACAGCAGTAAGAAGGATGATTCTGAGGTAATTGAGTCGTTGCAGGACTTGGCATTCAAACACCCTTCATACGGGT
TTAGAAAGCTGTTTGCCTACCTGCGAAGATCAGGTAAGCCATGGAATCATAAGCGAGTTCACCGCATTTATCAAGTTTTG
AAGCTGAATAAGAGGCGAAAGGGGAAGCGGCGATTACCCGATCGGGTTAGGCAACCTTTAGCTCAGCCAGCGCAGGTGAA
TGAAGTTTGGAGTGTCGATTTTATGAGCGACAGTATGGTCGGCAACCGCAAATTCCGAACGTTCAACGTCATTGACGACT
GCTCACGTGAGGCATTGGCCATAGAAATCGATACTTCACTTTCCGCGAAGCGGATCATTAGGACTTTGAACCGTATTGGA
GAAAGCAGAGGATTCCCAATGGCGATCAGATCGGACAACGGACCGGAATTCACTTCCGGAAATTTCACGATCTGGTGTGA
GGAAAAAGGCATTGAAGCCAAATTTATACAGCCAGGCAAGCCAACGCAAAATGGCTATATCGAACGATTTAATCGACTGT
ACAGAGAAGCTGTATTAGACGCTTATTTGTTCTTCGACCTGGATCAGGTCAGGCAATTAACCGCGGAATGGATTGAAGAA
TATAACCAGCGACGACCACATGAAGGACTGGGCAATTTGACACCATTTGAATGGAAGGAATCGCTGGTGAAAAAGAAAAT
TCACCACCAAATGACTGTCTGA

Protein sequence :
MTEEIVREHDIAVSRACKIVSLVRSQYYYSSKKDDSEVIESLQDLAFKHPSYGFRKLFAYLRRSGKPWNHKRVHRIYQVL
KLNKRRKGKRRLPDRVRQPLAQPAQVNEVWSVDFMSDSMVGNRKFRTFNVIDDCSREALAIEIDTSLSAKRIIRTLNRIG
ESRGFPMAIRSDNGPEFTSGNFTIWCEEKGIEAKFIQPGKPTQNGYIERFNRLYREAVLDAYLFFDLDQVRQLTAEWIEE
YNQRRPHEGLGNLTPFEWKESLVKKKIHHQMTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 6e-55 52