Gene Information

Name : Dfer_0846 (Dfer_0846)
Accession : YP_003085266.1
Strain : Dyadobacter fermentans DSM 18053
Genome accession: NC_013037
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 1008382 - 1009437 bp
Length : 1056 bp
Strand : -
Note : TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: npu:Npun_F6485 arsenical-resistance protein

DNA sequence :
ATGATTAATCACAAACAGCCTATGAAGGAAAAGCGGCTTTCATTTCTTGACCGTTATTTGACGGTCTGGATCTTCCTTGC
CATGCTTTTGGGTGTGTCCATCGGGTATTTTTTTCCAGGCACACCCGATTTTATCAATCAGTTTAATTCAGGCTCGACCA
ATGTGCCGCTGGCCATCGGACTGATCCTGATGATGTACCCGCCACTTGCCAAAGTACGTTATTCGGAGCTTTCACAAATA
TTCCGGAATACCCGTATTCTTGGCCTGTCACTGCTGCAAAACTGGATCGTGGGGCCGCTGCTGATGTTCGGCCTGGCAGT
AGCATTCCTACCAGATAAACCGGAATACATGACGGGATTGATCATGGTCGGTATCGCACGTTGCATTGCAATGGTGATCG
TCTGGAATGACCTTGCAGGCGGCGACCGGGTATATGCAGCCGGGCTGGTAGCATTCAACAGCATTTTTCAGGTGCTGTTT
TATTCAGTATATGCCTATGTGTTCGTGACGCTGCTGCCGCCATTGTTTGGGCTGAAAGGGTTCGAGGTCAATATTACTAT
TGGAGAAGTAGCGCAAAGCGTCTTTATCTATCTCGGCATTCCGTTCCTGGTCGGGATCATTTCGCGGGAAATATTGACCA
GGTTGTTTAGTCAGCATTGGTATAAAAAGAAATTCCTACCGGCTGTCAGCCCCATTACCCTGATCGCATTGCTGTTTACA
ATAGTGGTGATGTTCAGCCTGAAAGGAAATCTGATCGTAAGTATCCCGCTGGACGTTCTGCGCATAGCCACTCCCCTATC
GATCTACTTTGTCATCATGTTCTTTTCTGCCTTTTATCTCTCAAAACGAGCAGGCGCGGATTACTCAAAATCCACCTCAC
TGGCATTCACGGCCGCAGGCAATAATTTCGAATTGGGCATTGCGGTTGCCATTGCTGTGTTCGGTATTGATTCCGGAGCT
GCATTTGCGGCGGTGATCGGGCCGCTGATCGAAGTGCCGGTGTTAATCCTGATGGTCAATTTCGCTAAACGGAAAAGACA
ATCATTTCTTCAGTGA

Protein sequence :
MINHKQPMKEKRLSFLDRYLTVWIFLAMLLGVSIGYFFPGTPDFINQFNSGSTNVPLAIGLILMMYPPLAKVRYSELSQI
FRNTRILGLSLLQNWIVGPLLMFGLAVAFLPDKPEYMTGLIMVGIARCIAMVIVWNDLAGGDRVYAAGLVAFNSIFQVLF
YSVYAYVFVTLLPPLFGLKGFEVNITIGEVAQSVFIYLGIPFLVGIISREILTRLFSQHWYKKKFLPAVSPITLIALLFT
IVVMFSLKGNLIVSIPLDVLRIATPLSIYFVIMFFSAFYLSKRAGADYSKSTSLAFTAAGNNFELGIAVAIAVFGIDSGA
AFAAVIGPLIEVPVLILMVNFAKRKRQSFLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 7e-101 59
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 5e-101 59
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 4e-77 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dfer_0846 YP_003085266.1 arsenical-resistance protein BAC0573 Protein 2e-110 65
Dfer_0846 YP_003085266.1 arsenical-resistance protein BAC0004 Protein 8e-85 53