Gene Information

Name : Dfer_0752 (Dfer_0752)
Accession : YP_003085178.1
Strain : Dyadobacter fermentans DSM 18053
Genome accession: NC_013037
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 892848 - 893591 bp
Length : 744 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pap:PSPA7_2004 short chain dehydrogenase

DNA sequence :
ATGAAAACCATGCTCATCACCGGCGCCAGCCGCGGAATAGGCGCTGCCATGGCCCGCCTCGCGGCCGAAAACGGCTTTGC
AGTCATCGTCAATTACCTCCATCATGAATGCGCGGCAGCCCAGGTTGTGGCCGACATTGTTTCAAAAGGAGGCCAGGCGG
CGGCGGTCCAGGCAGACATTTCGCGTGAAAACGATGTTCTGAGGCTGTTCGAAGAGGCGGACCGGCTGTTCGGCAACCTG
CATGCGCTGGTGAACAATGCAGGTATTTTGGAACCGCAGATGCGGCTGGAACAAATGGACGCGGCGAGGCTCAACCGCAT
TTTCGCAGCCAATGTCACCGGGCAGTTCCTTTGCGCCCGCGAGGCGATCAAACGCATGTCGGTGAAGCATGGAGGACAGG
GCGGAACGATCGTCAACGTATCGTCCATCGCCGCCCGCACCGGCGCTCCCGGCGAGTACATCGACTATGCGGCGTCCAAA
GGTGCCCTGGACACCTTCACGCTGGGGCTTTCCAGGGAAGTGGCCGAAGAGGGTATCCGGGTGAATGCGGTCAGGCCGGC
GTTTATTTACACCGATATCCATGCATCCGGCGGCGAGCCGGGCCGTGTGGACCGGATCAAGGACTCCATTCCGTTGAAAC
GCGGCGGTTTGGCCGCCGAAGTGGCCGAGGCGATCCTGTGGCTGTCAACGGAAAAATCGTCCTATTCGACGGGCATTTTT
ATTGATGTGACGGGCGGGAAGTAG

Protein sequence :
MKTMLITGASRGIGAAMARLAAENGFAVIVNYLHHECAAAQVVADIVSKGGQAAAVQADISRENDVLRLFEEADRLFGNL
HALVNNAGILEPQMRLEQMDAARLNRIFAANVTGQFLCAREAIKRMSVKHGGQGGTIVNVSSIAARTGAPGEYIDYAASK
GALDTFTLGLSREVAEEGIRVNAVRPAFIYTDIHASGGEPGRVDRIKDSIPLKRGGLAAEVAEAILWLSTEKSSYSTGIF
IDVTGGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 1e-63 60
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 1e-64 59