Gene Information

Name : Dfer_0072 (Dfer_0072)
Accession : YP_003084508.1
Strain : Dyadobacter fermentans DSM 18053
Genome accession: NC_013037
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 88742 - 90295 bp
Length : 1554 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: fjo:Fjoh_2967 aldehyde dehydrogenase

DNA sequence :
ATGGATACGATCACCGAAAACACGGGAGTTGAGAGTAAAACGTACAGCAGTGAAAATTTGGCTAAACGGCCTGATTTCAA
GGAAAAATATGATAACTATATCAACGGCCGCTTTGTAGCCCCGGCTAAGGGCGAATATTTTGAAAACATTTCCCCTGTCG
ACGGCCGTGTGTTTACCAAGGCAGCGCGGTCGACGAAGGAGGACGTGGAGGCTGCACTCGATGCGGCGCACGCGGCGTTC
CCGGCTTGGAGCAAAACTTCCGCTACCAACCGCAGTAACCTGCTCCTGAAAATCGCGCAGGTGATCGAGGACAACCTCGA
ATACCTGGCCATTGTAGAAACGATCGACAACGGCAAGGCCATCCGCGAAACCCGCGCGGCCGATTTGCCCTTGTGCGTCG
ACCATTTCCGCTATTTCGCCGGTGTGATCCGCGCCGAGGAAGGCAGCATTGCCGAGCATGACGAAAACACCGTTTGCATT
AACCTGCATGAGCCGCTCGGCGTGGTGGCGCAGATTATCCCCTGGAATTTCCCGCTGCTGATGGCCACCTGGAAAATCGC
CCCGGCACTGGCGGCAGGTAACTGCGTGGTGGTGAAGCCCGCCGAGCAAACGCCCACTTCCATCATGATTTTAATGGAGC
TCATTGGAGACATTCTGCCTCCGGGCGTGCTTAATATCGTAACCGGTTTTGGTGTGGAAGCCGGTAAGCCGCTTGCCTCC
TCACCGCGCGTGGCGAAGGTGGCATTCACGGGTGAAACCACCACGGGCCGCCTGATCATGCAATATGCTTCGGATAACCT
CGTGCCCGTTACGATGGAGCTGGGCGGCAAGTCGCCGAATATCTTCTTCCCGTCGGTAATGGACGCCGACGATGAATTTC
TGGACAAAGCCATTGAAGGCGCCGTGCTGTTCGCATTGAACCAGGGCGAGGTGTGTACCTGCCCGTCGCGGATGCTGGTA
CACGAGAGCATTTATGACCGCTTTATAGAGCGGGTTATCCAGCGGACGAAAGCCATTAAAATGGGCCACCCGCTCGACGG
CACCACCATGATGGGCGCCCAGGCGTCGAACGACCAGTACGAAAAGATTTTATCCTATCTCAATATCGGCAAGGAGGAAG
GTGCCGAGGTGCTCACCGGCGGTGCGGCGCAGCGTTTCGAGAATGGCATTTCGGGCGGTTACTATATTCAGCCGACGATT
TTTAAAGGCCATAACAAAATGCGGATCTTCCAGGAAGAAATTTTCGGTCCGGTAGTGTGCGTAACCACGTTCAAAACCAC
CGAAGAGGCCATTTCCATTGCAAACGATACCCTTTACGGATTGGGCGCGGGCGTGTGGACGCGCGACGCGCACGAGCTGT
ACCAGGTACCACGGGCGATCCAGGCGGGTAGGGTGTGGGTGAATAATTACCACGCCTACCCCGCCCACGCTCCGTTCGGA
GGCTATAAAAAGTCGGGATTTGGCCGGGAGAACCACAAGATGATGCTGGGTTACTACCGCCAGACCAAAAACATGCTGAT
TTCGTACGATAAGAACAAGCTGGGATTTTTCTGA

Protein sequence :
MDTITENTGVESKTYSSENLAKRPDFKEKYDNYINGRFVAPAKGEYFENISPVDGRVFTKAARSTKEDVEAALDAAHAAF
PAWSKTSATNRSNLLLKIAQVIEDNLEYLAIVETIDNGKAIRETRAADLPLCVDHFRYFAGVIRAEEGSIAEHDENTVCI
NLHEPLGVVAQIIPWNFPLLMATWKIAPALAAGNCVVVKPAEQTPTSIMILMELIGDILPPGVLNIVTGFGVEAGKPLAS
SPRVAKVAFTGETTTGRLIMQYASDNLVPVTMELGGKSPNIFFPSVMDADDEFLDKAIEGAVLFALNQGEVCTCPSRMLV
HESIYDRFIERVIQRTKAIKMGHPLDGTTMMGAQASNDQYEKILSYLNIGKEEGAEVLTGGAAQRFENGISGGYYIQPTI
FKGHNKMRIFQEEIFGPVVCVTTFKTTEEAISIANDTLYGLGAGVWTRDAHELYQVPRAIQAGRVWVNNYHAYPAHAPFG
GYKKSGFGRENHKMMLGYYRQTKNMLISYDKNKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-145 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-150 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-150 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-150 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-149 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dfer_0072 YP_003084508.1 aldehyde dehydrogenase VFG0082 Protein 2e-145 63