Gene Information

Name : Dfer_5709 (Dfer_5709)
Accession : YP_003090062.1
Strain : Dyadobacter fermentans DSM 18053
Genome accession: NC_013037
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6863553 - 6864227 bp
Length : 675 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gfo:GFO_1949 ABC-type transporter ATP-binding protein

DNA sequence : 
ATGAATACCATACTCGATCTGCACGAAGTCAGTAAAATATACAAAAGCGGTGACCGCACCCTCAAAGTCCTCGACAATAT
CAGTTTTTCCATCGAAACCGGCTCGATCGTCTCCATTGTGGGCCCTTCCGGAAGCGGTAAAACGACGCTTCTGGGCCTCT
GCGCCGGGCTCGACCGGTCTACATCTGGCAGCGTAGAGCTGCACGGAACCCGCCTCAACGGGCTGAACGAAGACCAGCTT
GCCGCCGTGCGTAACCAGTATGTCGGATTTATCTTCCAGAATTTCCAGCTGCTCCCGACGCTCACGGCTTTGGAAAACGT
AATGGTGCCGATGGAGCTGCGCGGTGAAAAGAATGTGAAACAGCGCGCCCTCGACCTGCTCGACAAAGTGGGCCTGGCCG
AACGCAGCCACCATTATCCCACCCAGCTCAGCGGCGGGGAACAGCAGCGCGTATCGCTCGCCCGTGCATTCTCGAACCAG
CCGCAAATCCTGTTCGCCGACGAGCCGACCGGCAACCTCGATGCCGAAACGAGTGAAAAAGTGGTAAAGCTGCTTTTCGA
CCTCAACCGCGAGGCCGGCACTACGCTGGTGGTGGTCACGCACGACCTCGAACTCGCTGCCAAAACCCAGCGCATTATCC
GCATTAAGGGCGGAAAAATTGTGGAGGCAAGCTAA

Protein sequence : 
MNTILDLHEVSKIYKSGDRTLKVLDNISFSIETGSIVSIVGPSGSGKTTLLGLCAGLDRSTSGSVELHGTRLNGLNEDQL
AAVRNQYVGFIFQNFQLLPTLTALENVMVPMELRGEKNVKQRALDLLDKVGLAERSHHYPTQLSGGEQQRVSLARAFSNQ
PQILFADEPTGNLDAETSEKVVKLLFDLNREAGTTLVVVTHDLELAAKTQRIIRIKGGKIVEAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dfer_5709 YP_003090062.1 ABC transporter NC_012469.1.7686878. Protein 4e-39 49
Dfer_5709 YP_003090062.1 ABC transporter CP001581.1.gene598.p Protein 6e-32 43
Dfer_5709 YP_003090062.1 ABC transporter NC_008702.1.4606598. Protein 2e-28 43
Dfer_5709 YP_003090062.1 ABC transporter CP001581.1.gene798.p Protein 7e-33 41