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Name : Dfer_5048 (Dfer_5048) Accession : YP_003089413.1 Strain : Dyadobacter fermentans DSM 18053 Genome accession: NC_013037 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 6100935 - 6101678 bp Length : 744 bp Strand : - Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS DNA sequence : GTGCGCATTCTAGGAATAATACCGGCCCGCTACGCTTCTACACGCTTCCCTGCCAAGGCTTTGGTGGACATCGGCGGCAA AAGCATGATCCAGCGGGTGTACGAACAGGCGTCCAAAGCTACTCAACTGGATCAGGTTATCGTAGCGACGGACGATGAAA GAATATTGTACCACGTCCGCGAGTTCGGCGGCCAGGCCGTGATGACTTCGCAGGACCACCAGAGCGGCACCGACCGCTGC TTCGAAGCGCTTTCGCAAACAGAGGGCACTTACGACTACGTGATCAACATCCAGGGCGACGAACCATTCATCAGCCCCGA GCCGATCGATCATCTAGCCTCTGTACTAAATGGCGAAACCGAGCTCGCCACATTGGTGAAAGTCATCGACAATGATGAAA TTCTCTTCAATGTGAATGTGCCAAAGGCGGTTTTGAATAAGCGAAATGAAGTGATGTATTTCAGCCGGCAAACAATCCCT TACCTGCGCAACGCACAAAGCCAGGAGGAGTTTCTGAAATCACACGTTTTTTACAAACACATCGGCATTTACGCCTACCG GACCGACGTTTTGGCCGAAATCACGAAGCTGCCGGTATCGGCACTGGAAAAAGCGGAAGCTTTGGAACAGCTTCGCTGGC TCGAAAACGGTTACGCGATCAAGGCCGTGGTCACTTCCGACGATTCGCACGGTGTGGACACGCCCGACGACCTCGATCGC GTTACGCGAAAATTTTTGCCGTAA Protein sequence : MRILGIIPARYASTRFPAKALVDIGGKSMIQRVYEQASKATQLDQVIVATDDERILYHVREFGGQAVMTSQDHQSGTDRC FEALSQTEGTYDYVINIQGDEPFISPEPIDHLASVLNGETELATLVKVIDNDEILFNVNVPKAVLNKRNEVMYFSRQTIP YLRNAQSQEEFLKSHVFYKHIGIYAYRTDVLAEITKLPVSALEKAEALEQLRWLENGYAIKAVVTSDDSHGVDTPDDLDR VTRKFLP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 4e-40 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 3e-40 | 45 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-40 | 45 |
