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Name : Dfer_5019 (Dfer_5019) Accession : YP_003089384.1 Strain : Dyadobacter fermentans DSM 18053 Genome accession: NC_013037 Putative virulence/resistance : Virulence Product : ATPase AAA-2 domain-containing protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6068935 - 6071475 bp Length : 2541 bp Strand : + Note : PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: chu:CHU_1079 ATP-dependent Clp protease, ATP- binding subunit DNA sequence : ATGGAAGCAAAATTTTCGAATAGAGTGAAAGAGGTAATCTCAATGAGCCGGGAAGAAGCCCTCCGCCTGGGTCACGATTA CATTGGTGCAGAACACTTGTTATTAGGAATGATACGCGAGGGTGATGGTGTAGCCATAGGTTTGCTGAAAAAGCTCGGCG TGTCGCTGGACGATGTGCGTCAGACGATCGAGCAGGCAACCAAAGGTGCAGCCACGAATAATGTTAAAAATTTACAGAAT ATCCCTCTGACGAGGCAGTCAGAGAAGGTATTGAAGATTACATATCTGGAAGCTAAAATTTTCAAAAGCACGCTCATCGG CACCGAGCATTTGCTTCTTTCGATATTGCGCGACGAAGACAATGTAGGAACCCAGATATTGCATAAATTCAATGTTAACT ACGAAGTCATCAAGGAAATGTTAGAATATCAATCATCCGGATCCAGACCTCATATGGGGCCGGAGACCGAAGACGGGGAT GATGAAGCCAGAGGCGGAATGTTTGGTGGTGGAAGCGGCTCTTCTTCCGGTAAAGAATCCAAAGGTGCTGAAAAGTCCCG TACACCTGTCCTGGATAACTTTGGAAGGGATTTAACCAAAATGGCGGAAGTAGGCAAGCTCGACCCGATCGTCGGACGTG AGAAAGAGATCGAACGCGTAGCCCAGATCCTGAGCCGTCGTAAAAAGAATAACCCGATCCTGATCGGTGAGCCTGGTGTG GGTAAAACAGCCATCGCGGAAGGCCTTGCATTGCGGATCGTTCAGAAAAAAGTATCTCGTGTGCTTTTCGGTAAGCGCGT CGTGACGCTCGACCTTGCTTCGCTCGTGGCCGGTACCAAATACCGCGGCCAGTTTGAAGAAAGAATGAAGGCGGTGATGA ACGAGCTGGAAAAATCACCGGACGTGATCCTGTTCATCGACGAGCTCCACACGATTGTGGGCGCAGGCGGTGCGTCAGGC TCGCTGGACGCTTCGAACATGTTCAAGCCGGCATTGTCACGCGGGGAAATCCAATGTATCGGAGCTACCACGCTCGACGA GTACCGCCAGTACATCGAGAAAGACGGCGCATTGGCCCGTCGTTTCCAGATGGTGATGGTGGACGCGACCTCGATCGAGG AAACGGTTCAGATTTTGACCAATATCAAAGACAAATACGAAGATCACCACCATGTGAACTATACGCCTGAGGCGATCAGC ACGGCGGTGAAACTTTCGGAAAGATATATCACAGACCGCTTCCTGCCGGATAAGGCCATTGACGTGCTCGATGAAGTAGG TGCGCGGGTGCATATCAGCAACATCACGGTTCCTGAGGATATTCTGGTGCTCGAAGAGCAAATTGAGAATATCAAACAGG AGAAAAACCGGGTAGTGAAAAGCCAGAAATACGAAGAGGCTGCTCAATTGAGAGATCGTGAGAAAAAACTGATCGACCAG CTGGAAAGAGCCAAACTCGCATGGGAAGAGGAAACCAAGCAGAAACGCTACACGGTAACAGAGCAAAATGTGGCTGAGGT AGTTGCGATGATGACTGGCATTCCTGTGACTAACGTTTCAATGGACGAAGGCAAGAAATTGCTGAACATGGCCGACGAAC TGAAAGGCAAGGTAATAGGCCAGGACCCGCCGATCGAGAAACTCGTGAAAGCGATCCAGCGTACACGCGTCGGCTTGAAA GATCCTAAGAAACCAATCGGTTCATTCATTTTCCTTGGACCAACCGGTGTGGGTAAAACCGAGCTTGCCAAAGTGCTCTC GACTTACCTGTTCGACAAGGAAGACTCGCTGGTGCGCATTGATATGAGCGAATACATGGAGAAATTCAGCGTATCGCGCC TGGTGGGAGCGCCTCCGGGATATGTGGGCTACGAAGAAGGTGGCCAGCTGACCGAAAAGATCCGCCGCAAACCTTACAGC GTAGTACTGCTCGACGAGATCGAAAAAGCGCACCCGGATGTGTTCAATATCCTACTGCAAGTGCTCGACGACGGTATTCT GACGGACGGTTTGGGCAGAAGAGTCGATTTCCGTAATACGATCATTATCATGACTTCGAACATCGGAGCGCGTGACCTGA AAGATTTCGGAACAGGAATCGGATTCTCGACCAAAGCAAGAGCCGAAAACCAGGACGATATTATGAAAGGAACTATCCAG AGCGCATTGCGTAAAGCATTCTCTCCGGAATTCCTGAACCGTCTCGACGATGTGATCGTGTTCAACTCGCTGCAACGCGA AGATCTGCACCGCATTATCGACATTTCACTGGGCAAACTGTTCAGCCGCGTGAAAGGCCTCGGTTACGAAATCGAATTGA CTATCGCTGCGAAAGACTTCCTGTCCGAAAAAGGCTATGATCCGCAATACGGAGCGCGTCCTTTGAACCGGGCGATCCAG AAATATCTGGAAGATCCCGTAGCGGAAGAAATACTGAAAGGCGACCTGCGCGAAGGCGATGTACTGGTGGCTGATCATGA AGAAAAGAGTGAACAACTCGTTATCAGTGTTCGCAAAAAAGAAGAAGAGCTCGCAAACTAG Protein sequence : MEAKFSNRVKEVISMSREEALRLGHDYIGAEHLLLGMIREGDGVAIGLLKKLGVSLDDVRQTIEQATKGAATNNVKNLQN IPLTRQSEKVLKITYLEAKIFKSTLIGTEHLLLSILRDEDNVGTQILHKFNVNYEVIKEMLEYQSSGSRPHMGPETEDGD DEARGGMFGGGSGSSSGKESKGAEKSRTPVLDNFGRDLTKMAEVGKLDPIVGREKEIERVAQILSRRKKNNPILIGEPGV GKTAIAEGLALRIVQKKVSRVLFGKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPDVILFIDELHTIVGAGGASG SLDASNMFKPALSRGEIQCIGATTLDEYRQYIEKDGALARRFQMVMVDATSIEETVQILTNIKDKYEDHHHVNYTPEAIS TAVKLSERYITDRFLPDKAIDVLDEVGARVHISNITVPEDILVLEEQIENIKQEKNRVVKSQKYEEAAQLRDREKKLIDQ LERAKLAWEEETKQKRYTVTEQNVAEVVAMMTGIPVTNVSMDEGKKLLNMADELKGKVIGQDPPIEKLVKAIQRTRVGLK DPKKPIGSFIFLGPTGVGKTELAKVLSTYLFDKEDSLVRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTEKIRRKPYS VVLLDEIEKAHPDVFNILLQVLDDGILTDGLGRRVDFRNTIIIMTSNIGARDLKDFGTGIGFSTKARAENQDDIMKGTIQ SALRKAFSPEFLNRLDDVIVFNSLQREDLHRIIDISLGKLFSRVKGLGYEIELTIAAKDFLSEKGYDPQYGARPLNRAIQ KYLEDPVAEEILKGDLREGDVLVADHEEKSEQLVISVRKKEEELAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dfer_5019 | YP_003089384.1 | ATPase AAA-2 domain-containing protein | VFG0080 | Protein | 9e-151 | 52 |
| Dfer_5019 | YP_003089384.1 | ATPase AAA-2 domain-containing protein | VFG0079 | Protein | 0.0 | 51 |
