Gene Information

Name : Dfer_5002 (Dfer_5002)
Accession : YP_003089367.1
Strain : Dyadobacter fermentans DSM 18053
Genome accession: NC_013037
Putative virulence/resistance : Unknown
Product : thymidylate synthase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0207
EC number : -
Position : 6052838 - 6053659 bp
Length : 822 bp
Strand : +
Note : KEGG: kpn:KPN_03236 thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: thymidylate synthase

DNA sequence :
ATGCAACAATACCACGACCTGCTGCGCCATATCCTGAAAGAGGGCGTCCGAAAAACCGACCGCACCGGCACCGGCACGAT
CAGCGTGTTTGGCTACCAAATGCGTTTCGACCTCAAAAAGGGCTTTCCGCTGGTAACGACCAAGAAAGTGCACACGAAGT
CGATCATCCACGAATTGCTGTGGTTTTTGCAGGGCGACACCAATATCGGTTACCTGAAAGAGCACAACGTGTCAATCTGG
GACGAATGGGCGGATGAAAACGGCGACTTGGGCCCGGTTTACGGCAAACAATGGCGGAGCTGGGCAGGTCCGGACGGGAA
GTCCGTCGACCAGTTGCAGGAGGTTTTGAAACAACTCAAAAACTCGCCTGATTCGCGCCGCATCATCGTATCGGCCTGGA
ATCCGGCCGAGCTGCCGCAGATGAAGCTGCACCCGTGCCATGCATTGTTCCAGTTTTATGTGGCGCCGCCCGATACCGGG
GCCGGCGAAACGAATGGCAAGCTTTCCTGCCAGCTCTACCAGCGCAGCGCGGATGTGTTCCTCGGCGTGCCGTTCAATAT
TGCCAGCTATGCATTGCTCACAATGATGATCGCCCGCGAATGCGACCTCGACCTGGGCGATTTCGTTTGGACCGGTGGTG
ATACGCACATTTACCTCAACCATTTGGAACAGGTAGAAACGCAGCTCAGCCGTGAGCCGCGCGCATTGCCGCAAATGATC
CTGAATCCCGGGGTGAAAAACGTGCTCGACTTCCGTTACGAGGATTTCGAGCTCGTGAACTATAACCCGTGGCCGGGTAT
CAAGGCGCCGGTGGCCGTGTAA

Protein sequence :
MQQYHDLLRHILKEGVRKTDRTGTGTISVFGYQMRFDLKKGFPLVTTKKVHTKSIIHELLWFLQGDTNIGYLKEHNVSIW
DEWADENGDLGPVYGKQWRSWAGPDGKSVDQLQEVLKQLKNSPDSRRIIVSAWNPAELPQMKLHPCHALFQFYVAPPDTG
AGETNGKLSCQLYQRSADVFLGVPFNIASYALLTMMIARECDLDLGDFVWTGGDTHIYLNHLEQVETQLSREPRALPQMI
LNPGVKNVLDFRYEDFELVNYNPWPGIKAPVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
thyA YP_001800914.1 thymidylate synthase Not tested Not named Protein 6e-79 61
thyA YP_189147.1 thymidylate synthase Not tested ¥ÕSP¥â Protein 5e-55 45