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Name : Dfer_4788 (Dfer_4788) Accession : YP_003089154.1 Strain : Dyadobacter fermentans DSM 18053 Genome accession: NC_013037 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 5790892 - 5792157 bp Length : 1266 bp Strand : + Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: wsu:WS0054 putative UDP-glucose 6- dehydrogenase DNA sequence : ATGTTACCTGGATCAGACGTCAGAATCGCCGTTATCGGGCTGGGCTATGTAGGCTTGCCACTCGCAGTGGCGTTCAGCAG GCGGTATGCGGTGACGGGTTTTGATATTAATAAACGGCGCATTCAGGAGTTGAAGGACGCCTACGACACGACCAAGGAGA TTTCCCGGCAGGATTTGCGCGAGGCCGCAAACCTGACGTTCTCATGGGACGAAGCCACGCTGAAAGCATGCCAGGTGTTC ATCGTTACCGTGCCTACGCCCGTCGATCATTACAAAAAACCCAATCTGACCTATCTGCTCAAAGCCAGCGCGATGATCGG GCAGGTGTTGAAAAAAGGCGACCTGGTGATTTACGAATCGACCGTTTATCCCGGCTGCACGGAAGATGATTGCGTGCCGG TGCTGGAACGGGAAAGTGGTTTGAAATTCAATGAGGACTTCTTTTGCGGCTATTCCCCGGAGCGGATCAACCCGGGCGAT AAGGTAAATACGTTTACGAAAATCAAAAAGGTGACGTCCGGCTCGACGCCCGAAATAGCGCGAATTGTGGACGAACTGTA TGCTTCGGTGATCGAAGCGGGCACGCACCGGGCATCGAGCATCAAGGTGGCGGAGGCTTCCAAGGCAATCGAAAATGCGC AGCGCGATGTGAATATCTCGTTTGTGAATGAACTGGCGCTGATCTTCGACCGGATGAACATTGATACCACCGAAGTGCTA GAAGCGGCCGCTACCAAATGGAACTTCCTGCAATACAAGCCGGGGCTGGTCGGCGGGCATTGCATTGGCGTTGACCCCTA TTATCTGGCTTACAAAGCGGAATCGCTGGGCTATTACCCGCAGGTAATTCTCTCCGGCCGGAGGGTAAATGATATGATGG GCGTATTTGTGGCCAACAAGCTGGTGAAACTGATGATCCGCAAAGGGCACAAGATCGAAGGCAGCAGGGTGCTTGTGCTG GGTATTACATTCAAGGAAAATTGTCCTGATATCCGCAACACGCGGGTGATCGATGTGTACCGCGAGCTCACCGATTTCGG AATGCAGGTGGAGGTGCACGACCCGTGGGCATCAGGCGAGCAGGTGCTGGCCGAGTACGATATTGCTTTGCTCGACAAAC CCTCAGGAAGGTATGAGGCTGTGATCCTGGCCGTTGCGCATCAGGAATTCCGTTCGATAGAATTCTCCGAGTTCACCGCT GCGGACTCGGTGATATTCGACCTGAAATCGGTGTTGCCGCAGGAAATGGTCGATTCACGGCTGTGA Protein sequence : MLPGSDVRIAVIGLGYVGLPLAVAFSRRYAVTGFDINKRRIQELKDAYDTTKEISRQDLREAANLTFSWDEATLKACQVF IVTVPTPVDHYKKPNLTYLLKASAMIGQVLKKGDLVIYESTVYPGCTEDDCVPVLERESGLKFNEDFFCGYSPERINPGD KVNTFTKIKKVTSGSTPEIARIVDELYASVIEAGTHRASSIKVAEASKAIENAQRDVNISFVNELALIFDRMNIDTTEVL EAAATKWNFLQYKPGLVGGHCIGVDPYYLAYKAESLGYYPQVILSGRRVNDMMGVFVANKLVKLMIRKGHKIEGSRVLVL GITFKENCPDIRNTRVIDVYRELTDFGMQVEVHDPWASGEQVLAEYDIALLDKPSGRYEAVILAVAHQEFRSIEFSEFTA ADSVIFDLKSVLPQEMVDSRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-123 | 57 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-123 | 57 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-106 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dfer_4788 | YP_003089154.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 7e-124 | 57 |
