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Name : Dfer_3818 (Dfer_3818) Accession : YP_003088187.1 Strain : Dyadobacter fermentans DSM 18053 Genome accession: NC_013037 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 4657701 - 4658993 bp Length : 1293 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTACAAACGAATTTTATCCGCGAAAACCGCGAACTAACCATCGCGGGACTGACTAAAAAGCATTTCAAGGATGCCGA GCAGGCGGTAGACCGCATTATCGAACTCGACGGCAGACGTCGTCAGGTCCAGCAGGAACTGGACGACGTGCTGGCTGCGT CCAACAACAAAGCCAAGGAAATCGGCGCATTAATGAAATCCGGCCAGAAAGCCGAGGCAGAAGCTGCCAAAGCCGACACT GCCGCATTGAAAGAGCGTTCCAAAGCTTTGGAAGAAGAGCATAAAGCATTCGAAGAAAACTTGCTGCAAGAGCTCGTAAA GCTCCCGAACCTCCCGCACGAAAGTGTGCCCGAAGGCCGCAGCGCGGACGATAATGTGACCGTTCTCGAAGCCGGTGCCA AGCCCGCATTGCACGAAGGCGCATTGCCGCATTGGGACCTGATCAGGAAGCTGGGTGGTAACCTGGCCCCGATCATCGAC TTTGAGCTCGGTAACAAAATTGCCGGTGCCGGTTTCCCCGTGTACAAAGGCAAAGCTGCCCGTTTGCAGCGCGCCATGAT CGCATTCTTTCTCAGCGAAGCGGGCAATGCAGGTTACAACGAGGTGCAGCCGCCGATCGTGGTGAATGCTGATTCAGGAT TCGCGACCGGGCAGTTGCCGGACAAGGAAGGTCAGATGTACCACGCGACTGTCGACGATTTGTACCTTATCCCGACCGCC GAAGTGCCTGTGACCAATCTTTATCGCGATGTAATCGTGGCTGAAAGTGAGTTACCGGTGAAAAACGTGGCATTTACGCC GTGCTTCCGCCGCGAAGCGGGCAGCTGGGGTGCACACGTACGCGGGCTGAATCGTTTGCACCAGTTTGATAAGGTGGAAA TCGTGCAGATCAACAAGCCGGAGGATTCTTATAAAGCCCTCGACGAAATGGTGGAGCACGTCAAAATGCTCCTCGAAAAG CTGGAACTGCCTTACCGCATTCTCCGCTTGTGCGGCGGCGATATGGGTTTCACGTCCGCATTGACTTACGATTTCGAAGT ATGGTCGGCCGGGCAGGGGCGCTGGCTGGAATGCAGCTCGGTTTCCAACTTTGAAACCTACCAGGCCAACCGTCTGAAAC TGCGCTACAAAAATGCCGACAAGAAAACGCAGCTGCTCCACACATTGAACGGCTCTGCATTGGCATTGCCGCGTATTCTG GCCGCATTGCTGGAAAACAACCAGCAGCCCGACGGAACCGTGAAAGTACCGGCGGTACTGGTGCCATTCTGCGGGTTTGA TGTGATTGAGTAA Protein sequence : MLQTNFIRENRELTIAGLTKKHFKDAEQAVDRIIELDGRRRQVQQELDDVLAASNNKAKEIGALMKSGQKAEAEAAKADT AALKERSKALEEEHKAFEENLLQELVKLPNLPHESVPEGRSADDNVTVLEAGAKPALHEGALPHWDLIRKLGGNLAPIID FELGNKIAGAGFPVYKGKAARLQRAMIAFFLSEAGNAGYNEVQPPIVVNADSGFATGQLPDKEGQMYHATVDDLYLIPTA EVPVTNLYRDVIVAESELPVKNVAFTPCFRREAGSWGAHVRGLNRLHQFDKVEIVQINKPEDSYKALDEMVEHVKMLLEK LELPYRILRLCGGDMGFTSALTYDFEVWSAGQGRWLECSSVSNFETYQANRLKLRYKNADKKTQLLHTLNGSALALPRIL AALLENNQQPDGTVKVPAVLVPFCGFDVIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-63 | 43 |
