|
Name : Dfer_3603 (Dfer_3603) Accession : YP_003087975.1 Strain : Dyadobacter fermentans DSM 18053 Genome accession: NC_013037 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 4402171 - 4403145 bp Length : 975 bp Strand : + Note : KEGG: chu:CHU_0298 KpsF/GutQ family sugar isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein DNA sequence : TTGAAATTAATAAAAAATATTCAGTCAATCGCAAAAGAAGTATTACGTCAGGAAGCGGAAGCTGTGCGTGATCTGATTGA ATTGATTGATGATGAATTTGAAAAATGCGTATACGCCATTTTACACTCGGGAGGGCGGGTTGTAATCTCCGGTGTGGGCA AAAGCGCGATCGTGGGACAGAAAATCGTAGCCACCCTGAATTCCACCGGCACACCGGCCCTTTTTATGCACGCCGCCGAC GCTATTCACGGCGATCTGGGCATGATCCAGGACAATGATGTTGTGATCGTAATTTCTAAAAGCGGCGATACGCCGGAGAT CAAAGTGCTCGTTCCGCTGCTGAAACGCACGGGCGTAAAAATGATCGCAATGGTGAGTAATAAGGACTCCTATTTGGCTA AAAACTGCATTCTCACGCTTCATGCGCACGCTCCCGCCGAGGCCGACCCACTGAACCTCGCTCCCACCACGAGCACTTCG GTCACCATGGCGCTCGGCGACGCGCTGGCGATCTGCCTGCTCGAAGCACGCGGCTTTACCCACGACGACTTCGCCCGCTA CCATCCCGGCGGCTCGCTGGGCAAGCGGCTTTACCTCAAAGTATGCGACATTTACCCGCATAACGCATTGCCTACCGTGA GCGAGCAGGCCACATTGCAAGAAGTAATTCTCGAAATGACCTCGAAAAGGCTCGGTGCGACGGCGGTTGTGAGCGAAAAT GGCCAAATGGCGGGCATTATCACCGACGGCGACCTCCGAAGAATGCTGAAAACTTATGGCGCAGCCGGTTTACTGGACCT GCACGCAAAAGATATCATGACGAAATCTCCGATCACCGTTTCACCCGATGAATATGCGGTGAATGCATTGGAGGTAATGC AGTCCAAAAGCATTACACAAGTTGTAGTGGTGGAAGAAGGTAAGGCGCTTGGATTCGTGCATTTGCACGATTTGCTGCGT GAAGGGTTGGTATAA Protein sequence : MKLIKNIQSIAKEVLRQEAEAVRDLIELIDDEFEKCVYAILHSGGRVVISGVGKSAIVGQKIVATLNSTGTPALFMHAAD AIHGDLGMIQDNDVVIVISKSGDTPEIKVLVPLLKRTGVKMIAMVSNKDSYLAKNCILTLHAHAPAEADPLNLAPTTSTS VTMALGDALAICLLEARGFTHDDFARYHPGGSLGKRLYLKVCDIYPHNALPTVSEQATLQEVILEMTSKRLGATAVVSEN GQMAGIITDGDLRRMLKTYGAAGLLDLHAKDIMTKSPITVSPDEYAVNALEVMQSKSITQVVVVEEGKALGFVHLHDLLR EGLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 9e-50 | 44 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-49 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-49 | 44 |
