Gene Information

Name : Dfer_1929 (Dfer_1929)
Accession : YP_003086320.1
Strain : Dyadobacter fermentans DSM 18053
Genome accession: NC_013037
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 2363576 - 2363989 bp
Length : 414 bp
Strand : -
Note : PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: lbf:LBF_2771 protein-tyrosine-phosphatase

DNA sequence : 
ATGAAAAAAGTATTGGTGCTATGCACCGGTAACAGTTGCCGGAGCCAGATCGCAGAGGGGTATTTGAGGCATTTTGCCGG
AGACAAGGCCGTCGTATACAGTGCCGGGGTAGAGACGCACGGCGTGAATCCCAAAGCGGTCGCGATCATGGCGGAGGATG
GAATAGATACTTCCAATCATACGTCGAACAACCTGGATGAATACGGCGACATCGATTTTGATTTCGTGCTCACCGTTTGT
GACAATGCCAAAGAGCGCTGCCCTTATTTCCCCACTAATGCAAAGCAATTCCACCACAACTTTCCTGATCCGGCAAAAGT
AACGGGTACTGAGGAAGAGGTTCTAGAAGCGTTCCGGGCCGTTCGTGAGCAGATTAAAACTTACTCTGAAAACTTTGTTA
AGAAAAATCTGTAA

Protein sequence : 
MKKVLVLCTGNSCRSQIAEGYLRHFAGDKAVVYSAGVETHGVNPKAVAIMAEDGIDTSNHTSNNLDEYGDIDFDFVLTVC
DNAKERCPYFPTNAKQFHHNFPDPAKVTGTEEEVLEAFRAVREQIKTYSENFVKKNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 3e-21 49
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 3e-19 48
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-19 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dfer_1929 YP_003086320.1 protein-tyrosine phosphatase BAC0581 Protein 2e-23 51
Dfer_1929 YP_003086320.1 protein-tyrosine phosphatase BAC0580 Protein 1e-21 50
Dfer_1929 YP_003086320.1 protein-tyrosine phosphatase BAC0032 Protein 1e-20 49