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Name : Dfer_1085 (Dfer_1085) Accession : YP_003085499.1 Strain : Dyadobacter fermentans DSM 18053 Genome accession: NC_013037 Putative virulence/resistance : Unknown Product : RNA binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1282796 - 1284913 bp Length : 2118 bp Strand : - Note : PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Resolvase RNase H domain protein fold; KEGG: pdi:BDI_1372 RNA-binding protein DNA sequence : ATGAACTACACCCTAATTGCACAACAGGCCGGCGTGAGCGACAAGCAAGCGCGGAATACCATTGCGCTGTTCGAAGAAGG CGCCACGGTGCCGTTTATCGCCCGGTATCGGAAGGAAGCGACCGGCGGGCTCGACGAGGTACAGATCGGCAACGTCCGGG ACGCCTGGCAGAAGCAGCAGGAAGTCGAGAAACGGCGTGAGGCTATTTTGAAGAGTATCGGGGAGCAGGGGAAACTCACT CCCGATCTGAAAAAGAAGATTGAAGCCGTTTTTTCACTGACTGAGCTCGAAGACCTTTACTTGCCCTATAAACAGAAAAG AAAGACCCGCGCAACCATTGCCATTGAAAAGGGTCTGGAACCGCTTGCAAAGCTGATTTTTGAAGGAAAAGAGCGCGATC CGGAAGGCAAGGCAGCATCGTTCCTGAATGATCAGGTGGCCAATGCGGCCGATGCATTGCAGGGCGCGAGGGATATTATC GCCGAATGGATCAACGAGAATCAGGAAGCGCGGACGAAGATCCGGTATACTTTTCAGAAGGGGGCGGTCATCACGTCGAA AGTCAAAAAGAAAAAAGAGGAGGAAGGGGCCAAATACCGCGATTATTTCGAGTTTTCGGAGCCTTTGGCCAAAATACCTT CCCACAGGCTGCTGGCATTGCGCCGGGGCGAGGAAGAGGGAATCCTGAGCGTGGATATTTCGCCGGACGAGGACTCGGCG CTCGAAGCGCTGGACCGGCTATTTATGTTTGGGACGGAGGCCTGTAAAGACCAGCTCGAACTCGCGATTGGCGATAGTTA CAAGCGGTTGCTGAAACCGTCCATTGAAACGGAGTTTGCCAATTTGTCCAAGGAAAAAGCCGACGTGGCCGCGATCCAGG TCTTCTCGGAAAACCTGCGGCAGCTGCTGCTCGCATCGCCATTAGGCCAGAAAACCGTGCTGGCGATCGACCCGGGCTAC CGCACGGGCTGCAAAGTAGTGGTGCTCGATGGCCAAGGCAACCTCATGGCCGACCACGTCATTTATCCTTTCGACAAGCC GGCTGATGCCGCCGCACGTATCAGCGAGCTCATCCGTAAGCACAAGGTGGAGGCCATCGCCGTCGGTAATGGAACGGCTG GGCGCGAGACGGAGGATTTTGTAAAGAAGCTGCTCGACGGTTCGGAAAAATCTTCGGAAATCGGGCTTTTCATGGTGAGC GAGCAGGGCGCGTCCATCTACTCGGCGTCGGAAGTGGCGCGGGAGGAATTCCCCGATAAGGATGTTACCGTTCGCGGCTC TGTGTCGATCGGGCGCAGGCTTATGGACCCGCTTGCGGAGCTCGTGAAGATCGATCCGAAATCCATTGGTGTAGGCCAGT ACCAGCACGATGTTGATCAGAATTCATTGCGAAATGCTTTGGATATAGTCGTAGAAAGCTGCGTGAATTCCGTAGGCGTA AATCTCAACACGTCGAGCAAGCATTTGCTGCGCTATGTTTCGGGCCTTGGGCCCGCTTTGGCGCAGAATATCGTGGATTT TCGGGCTAAAAACGGAAATTTCAAATCACGCCAGCAATTATTGAAAGTGCCGCGCCTCGGGGCCAAGGCTTTCGAGCAGG CCGCAGGCTTCCTGCGTATTGAAAATGGAGCTAATCCATTGGATAACAGCGCAGTACACCCGGAGCGATATGCCCTCGTA GAGCAAATGGCGAAGGATGCAGGCAGTACTGTGAAGGATCTGATGCAGAAAGCCGAGCTGAGGCGGCAGGTCAGGATCGA AAAGTATGTTTCGGAGTCGGTGGGGTTGCCTACGTTAAAGGACATCCTGGCCGAGTTGGAAAAACCGTCGCGTGACCCGC GCGCGGAAATCAAGAAGTTTGAGTTCGACAGTTCCGTCCGGAAGCCCGAGGACCTGAAAGTCGGAATGGTGCTCCCGGGC ATCGTCACCAACATCACAGCCTTCGGCGCGTTTGTCGATGTGGGCGTGAAGCAGGACGGCCTGGTGCACGTGTCACAAAT GGCCGAGAAGTTTGTGAAAGATCCGAACGAAGTCGTGAAGTTGCAGCAGCACGTGACCGTGAAAGTCACCGAGGTAGACC TCGCCAGGAAGCGGATCGCATTGTCGATGAAACTTTGA Protein sequence : MNYTLIAQQAGVSDKQARNTIALFEEGATVPFIARYRKEATGGLDEVQIGNVRDAWQKQQEVEKRREAILKSIGEQGKLT PDLKKKIEAVFSLTELEDLYLPYKQKRKTRATIAIEKGLEPLAKLIFEGKERDPEGKAASFLNDQVANAADALQGARDII AEWINENQEARTKIRYTFQKGAVITSKVKKKKEEEGAKYRDYFEFSEPLAKIPSHRLLALRRGEEEGILSVDISPDEDSA LEALDRLFMFGTEACKDQLELAIGDSYKRLLKPSIETEFANLSKEKADVAAIQVFSENLRQLLLASPLGQKTVLAIDPGY RTGCKVVVLDGQGNLMADHVIYPFDKPADAAARISELIRKHKVEAIAVGNGTAGRETEDFVKKLLDGSEKSSEIGLFMVS EQGASIYSASEVAREEFPDKDVTVRGSVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQNSLRNALDIVVESCVNSVGV NLNTSSKHLLRYVSGLGPALAQNIVDFRAKNGNFKSRQQLLKVPRLGAKAFEQAAGFLRIENGANPLDNSAVHPERYALV EQMAKDAGSTVKDLMQKAELRRQVRIEKYVSESVGLPTLKDILAELEKPSRDPRAEIKKFEFDSSVRKPEDLKVGMVLPG IVTNITAFGAFVDVGVKQDGLVHVSQMAEKFVKDPNEVVKLQQHVTVKVTEVDLARKRIALSMKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 7e-156 | 50 |
