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Name : etpD (ECSP_6003) Accession : YP_003082137.1 Strain : Genome accession: NC_013010 Putative virulence/resistance : Virulence Product : type II secretion protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 3663 - 5615 bp Length : 1953 bp Strand : + Note : - DNA sequence : TTGAATGGGCGTTTGCCGGTACTTGTGTTCACTACAGTAATTTTGGGGGCCATTCCAGGGTGGGGGGCTGAATTTTCGGC CAACTTTAAAGATACGGATATTCAGGAGTTCATAAATACTGTCAGTAAAAATTTACACAAAACGGTAATAATTAATCCTG ACGTGCAGGGAACCATCACTGTACGCAGCTACGATATGCTGAACGAGGAACAATATTATCAGTTCTTTCTCAGTGTGCTG GACGTTTATGGTTTTGCTGTGGTCGATATGCACAACGGTATACTGAAAGTAGTGCGCTCAAAAGATGCCAAAACGTCGGC GGTGCCGGTAGCTAGTGATGTCAGTCCCGGGACTGGTGATGAGGTTGTTACCCGGGTGGTCCCCGTAAGTAACGTGGCAG CCAGAGATCTGGCGCCTTTGCTGCGTCAGCTCAATGATAATGCTGGCGCAGGAAGCGTGGTGCATTATGAACCTTCTAAT GTTTTGTTGATGACCGGACGTGCTGCAGTGATGAAACGGTTGATGGAGATTGTTGAACGTGTGGATAAGGTGGGTAATCG CAGCGTTGCCACGGTCCCGCTCACCTACGCGTCCGCAACAGACGTAGCCAGACTTGTTACGGAACTGACTAAAGAAACAG ATAAGACAGCTATACCTGCTTGGATGACGGCGAAACTGGTTGCAGACGAGAGGACAAACTCAGTGCTCGTCAGCGGAGAG CCAATCTCCCAACAGCGTATCATCTCCATAATTAAGCAACTGGATCGTCAGGAGGATGTTCAGGGTAATACTAAGGTGAT TTACCTGAAATATGCGAAGGCGAAGGATTTAGTGGAAGTCCTGACAGGTATCAGCAGCAGTATTGAAAACGACTCTAAAA AGAGTCCGTCAACGGAAGCCTTGCGCAAAGGAGTGACGATTAAATCCCACGAACAAACCAATGCCCTGATCCTGACGGGG GCCCCTGACGTCATCCGCGACCTTGAAAATGTGATTTCGCAGTTGGATATTCGTCGTCCTCAGGTCCTGGTGGAGGCCAT CATTGCTGAAATACAGGATGCTGACGGGCTGAACCTTGGGATCCAGTGGGTGAATAAACATGCCGGTGTGGCGCAGTTCA CCAGTACCGGTTTACCTATTACCACGATGGTTCAGACTCGTCAGAACGAAATCTTAGACAGCGATCAGAGCAATGCCCTG AGCATGTTTAACGGAATTGCAGCGGGGTTTTATCAGGGAAACTGGGCGATGCTGTTGACGGCGCTCTCCACAAGTAGCAA GAATGATATCTTGGCGACCCCCAGTATTGTCACGCTGGACAATATGGAGGCCACTTTCAATGTTGGTCAGGAGGTCCCGG TACTTTCGGGCTCACAGACAACCTCTGGGGACAATATTTTTAACACGGTCGAGCGCAAAACGGTGGGGATCAAACTCAGG GTAAAACCCCAGATCAACGAGGGTGATTCCGTGTTACTGGAGATAGAACAGGAGGTGTCCGGTGTGGCGGACACTGCAGT AGCCACCACTACTGACTTGGGAGCAACCTTCAACACCCGAACAGTGACCAATGCCATGCTGGTCGGGAATGGCGAAACGG TGGTGGTCGGAGGATTACTGGATAAGTCGATCAGGGGGAGTGAGAGTAAAGTGCCACTGCTGGGGGATATCCCGGTACTG GGGCATCTTTTTCGCGCAAAAAGCGAACAGACAGCTAAGCGTAATCTGATGCTGTTCATTCGGCCAACTATTATTCGTGA GCGCGACGGATTTCGTCATGCTTCGGCCGAAAAATACCAGTCGTTTAATCAGGAACAGGTGCAGTCGCGTGGCAAAGAAA CAACGGCGCTGACGCTGAATGAGGAACAGCTCAGGCTGTCCCCCGATCAAGACGATACGGCTTTCCGGAAGGTGAAAGCG GCGATTGCTGCGTTTTATGCGCAGGAGATGTAA Protein sequence : MNGRLPVLVFTTVILGAIPGWGAEFSANFKDTDIQEFINTVSKNLHKTVIINPDVQGTITVRSYDMLNEEQYYQFFLSVL DVYGFAVVDMHNGILKVVRSKDAKTSAVPVASDVSPGTGDEVVTRVVPVSNVAARDLAPLLRQLNDNAGAGSVVHYEPSN VLLMTGRAAVMKRLMEIVERVDKVGNRSVATVPLTYASATDVARLVTELTKETDKTAIPAWMTAKLVADERTNSVLVSGE PISQQRIISIIKQLDRQEDVQGNTKVIYLKYAKAKDLVEVLTGISSSIENDSKKSPSTEALRKGVTIKSHEQTNALILTG APDVIRDLENVISQLDIRRPQVLVEAIIAEIQDADGLNLGIQWVNKHAGVAQFTSTGLPITTMVQTRQNEILDSDQSNAL SMFNGIAAGFYQGNWAMLLTALSTSSKNDILATPSIVTLDNMEATFNVGQEVPVLSGSQTTSGDNIFNTVERKTVGIKLR VKPQINEGDSVLLEIEQEVSGVADTAVATTTDLGATFNTRTVTNAMLVGNGETVVVGGLLDKSIRGSESKVPLLGDIPVL GHLFRAKSEQTAKRNLMLFIRPTIIRERDGFRHASAEKYQSFNQEQVQSRGKETTALTLNEEQLRLSPDQDDTAFRKVKA AIAAFYAQEM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-117 | 45 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 2e-126 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| etpD | YP_003082137.1 | type II secretion protein | VFG2047 | Protein | 1e-114 | 44 |
