|
Name : ctaD (NRI_0593) Accession : YP_003081807.1 Strain : Neorickettsia risticii Illinois Genome accession: NC_013009 Putative virulence/resistance : Unknown Product : cytochrome c oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 558220 - 559779 bp Length : 1560 bp Strand : + Note : identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 DNA sequence : ATGAATAAACATTCAGAGGTCCCTAGCGGCATAAGGCGTTGGCTTTTTTCAACGAATCACAAAGACATAGGTACTTTGTA CATTATTCTTTCCGTGGTTGGGGGAATTGTAGGTGGCCTTTTCTCGTTGATGCTACGTGCGCAACTTGCACACTTAGATG TCTTTATGGGTAACTATCAACTCTACAATGTATCTATAACTGCTCATGCGGCGGTTATGGTGTTCTTCATGCTTATGCCA GCACTCATAGCTGGATTTGGAAACTGGTTCGTTCCACTTATGATTGGAGCACCAGATATGTGTTTTCCGAGGCTCAATAA CATCAGCTTTTGGATACTTTTCTTCTCTTTGGTGATTATCGTCATGTCTGCACTTATTGGCGAAGGACCTGGTACAGGTT GGACATTCTATCCACCACTCTCAGGAATTCATTTTCACCCTGATGTATCCATTGATTTAGCAATTTTCGGTTTGCACCTG GCTGGTATTTCATCCATTCTCGGGGCTATCAACTTTATTGCGACCATACTTAACATGCGTGCACCTGGCATGACATTGTT CAAGATGCCGCTTTTTGTGTGGTCTATTTTTGTGACATCTATTCTTGTCCTCATAGTAATGCCGGTTCTAGCTGGTGCTC TTATGATGTTGCTTACCGACCGTAATTTAGGTACAGCTTTTTTTGAAGTCGCAGGTGGTGGTGATCCGCTTCTTTTCCAA CACTTGTTCTGGTTCTTTGGTCACCCTGAAGTTTATATTATTATCCTTCCTGCCTTTGGTATTGTTAGTGAAGTTGTGTC TACTTTCTCGCAGAAGCCGGTTTTTGGTTACAAAGGTATGGTTGCTGCAATGGCGATAATTGGCATAATCGGTTGTTTCG TGTGGGCTCACCACATGTTTATTACTGGTATTAACTTTAATGCTCTTGCCTACTTCACCGTTGCAACAATGCTAGTTGGT GTTCCAACAGGCATAAAAGTCTTTAGTTGGATAGCAACGATGTGGGGTGGTTCTATAGATCTTAAAGCACCTATGCTCTT CGCTATAGGCTTTATGTTCTTGTTTGTGGTTGGCGGCGTTACAGGTATTGCGCTCTCAAATTCTGCGCTAGATAAGGCTC TGCACGACACATACTATGTTGTTGGACATTTTCACTATGTGATGTCGATCGCAGCGCTTTTTGTTGTATACAGTGCTTTC TATTACTGGATTGGTAAAATTTCGGGGAGACAGTACAACGAGTGCTTTGCTAAAATCCATTTTTGGATCACGCTCATTAG CGTAAATATAACATTCTTACCACACCACTTTTTGGGCCTAGCAGGTATGCCAAGAAGAATACCTGACTATCCGGATGCAT TCATTCCGTGGAACTATGTTTCTTCTTTTGGCTCGGTGCTTGCATTTGGATCGGCGTTATTTTTTGTGTTTATAGTTTTT CACACACTCTATAAAGGGAAAAAATGTGAAGCTAATCCTTGGGGTGGCAAAACTTTGGAATGGACTTTATCATCTCCTCC TCCGTTCCATTCGTTTGAAAAGCAACCAGTGGTAGAATAA Protein sequence : MNKHSEVPSGIRRWLFSTNHKDIGTLYIILSVVGGIVGGLFSLMLRAQLAHLDVFMGNYQLYNVSITAHAAVMVFFMLMP ALIAGFGNWFVPLMIGAPDMCFPRLNNISFWILFFSLVIIVMSALIGEGPGTGWTFYPPLSGIHFHPDVSIDLAIFGLHL AGISSILGAINFIATILNMRAPGMTLFKMPLFVWSIFVTSILVLIVMPVLAGALMMLLTDRNLGTAFFEVAGGGDPLLFQ HLFWFFGHPEVYIIILPAFGIVSEVVSTFSQKPVFGYKGMVAAMAIIGIIGCFVWAHHMFITGINFNALAYFTVATMLVG VPTGIKVFSWIATMWGGSIDLKAPMLFAIGFMFLFVVGGVTGIALSNSALDKALHDTYYVVGHFHYVMSIAALFVVYSAF YYWIGKISGRQYNECFAKIHFWITLISVNITFLPHHFLGLAGMPRRIPDYPDAFIPWNYVSSFGSVLAFGSALFFVFIVF HTLYKGKKCEANPWGGKTLEWTLSSPPPFHSFEKQPVVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 7e-82 | 44 |
