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Name : serS (NRI_0544) Accession : YP_003081760.1 Strain : Neorickettsia risticii Illinois Genome accession: NC_013009 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 505556 - 506803 bp Length : 1248 bp Strand : - Note : identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414 DNA sequence : ATGAATGATCTCGAGTATATAGTCTCTAATCCAGAAGTGTTCACTGAGATGATGAAGAGGCGGGGCGCAAGCTTTAATCC TCTACCTCTAATTACGCTGTATGAAGAACGAAAAAGTTGTGTAACTTCACTCAATAATCTCCAAGCGAGCAAAAACGAAT TGACCAAATCTTTTCAGGTTATTCAGGAGGGCAAAGGTGAGCTTTTTGAAAAAGCCAAAGTGATAGATAAGGAAATTCTA AGAGTTAAGGAGGATCTCCAAAAAATTTGTGAGCAGCTTGAGTTGATGATGTTAGATTTACCTAACATTTTAGCTGAAGA TGTCCCAATAGGTGAAAATGATAGATCTAACGTTGTAGTAAAGTCATGGGGTGTGGTTAGGGATTTTGGTTTTGAACCCA AAGCCCATGATGAACTTGGTGTTGCTCTGGGTATATTGGATTTTTTAAATGTTGCTAAGGTTTCAGGGGCGAGATTTTCG GGATTCATTGGCAAGGGGGCGAGGCTGTTTAGAGTGCTCAAAGATTTCATGCTTGATCACAATACAGAGCATGGTCACCG TGAATATTTTCTACCATACCTGGTAAAAGAAGATGCTATGTATAAAGCCGGGCAGTTACCGAAGTTTTCCCAAGAGTCAT TTAGGGTGGATGGCGGAATGCGCTTGGTTCCCACAAGTGAAGTTACTCTGCTAAACTTTGTGTCTGATAATTTTTTTGGG GAGGCTGAACTACCACTTAGGATGACATCCTACAGTGAATGTTTCCGTTCTGAGGCAGGGAGCAGTGGTAAGGATACTAA AGGTATAATACGGCAACATCAGTTTGGCAAGGTCGAGCTTTTGTCGATAACGGAGCCGGAAAAATCGGATGAGGAACTCG AGCGAATGTTGTGCATAGCTGAAGGTTTATTACAGAAGCTGAAGCTACCATACCGAGTTGTTAATTTATGTTCGGGTGAT ATTGGCTTCTGTTCAAAAAAAACATATGATATAGAGGTTTGGATTCCATCTCAATGCTGTTACAGAGAGATTTCTAGTTG TTCCAACTGTGGGGATTTTCAATCTAGAAGATTAGCGATCAAGTATAAATTCAAGAAAAAAAAGGGCTTTTTGCATACAC TGAATGCGAGCTCTCTTGCTATTGGTAGAACTATTGTTGCAATTTTGGAGAATTATCAGATGCATGATGGTTCTATTGAA GTTCCAGAAGTCTTGAGAAGCAGGTTCGGTGCTGATTTTATCAAGTAG Protein sequence : MNDLEYIVSNPEVFTEMMKRRGASFNPLPLITLYEERKSCVTSLNNLQASKNELTKSFQVIQEGKGELFEKAKVIDKEIL RVKEDLQKICEQLELMMLDLPNILAEDVPIGENDRSNVVVKSWGVVRDFGFEPKAHDELGVALGILDFLNVAKVSGARFS GFIGKGARLFRVLKDFMLDHNTEHGHREYFLPYLVKEDAMYKAGQLPKFSQESFRVDGGMRLVPTSEVTLLNFVSDNFFG EAELPLRMTSYSECFRSEAGSSGKDTKGIIRQHQFGKVELLSITEPEKSDEELERMLCIAEGLLQKLKLPYRVVNLCSGD IGFCSKKTYDIEVWIPSQCCYREISSCSNCGDFQSRRLAIKYKFKKKKGFLHTLNASSLAIGRTIVAILENYQMHDGSIE VPEVLRSRFGADFIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-79 | 47 |
