|
Name : sgaE (ECSP_5298) Accession : YP_003081054.1 Strain : Escherichia coli TW14359 Genome accession: NC_013008 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : - Position : 5308688 - 5309374 bp Length : 687 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGCAAAAGCTAAAACAGCAGGTGTTTGAAGCCAACATGGATCTGCCGCGCTATGGGCTGGTGACCTTTACCTGGGGCAA CGTCAGCGCTATCGACCGCGAACGCGGGCTGGTGGTGATCAAGCCCAGCGGCGTCGCCTACGAAACCATGAAAGCAGACG ATATGGTGGTGGTCGATATGAGCGGTAAGGTGGTGGAAGGGGAATATCGTCCGTCTTCCGACACCGCGACGCATCTCGAA CTCTACCGTCGTTATCCGTCGCTTGGCGGCATTGTCCATACCCACTCCACTCATGCTACCGCATGGGCGCAGGCGGGGCT GGCGATCCCGGCGTTAGGCACCACGCACGCTGACTACTTCTTTGGTGATATCCCGTGTACGCGTGGATTAAGCGAAGAAG AGGTGCAGGGTGAGTATGAACTGAACACTGGCAAAGTGATTATCGAAACGCTGGGCAACGCCGAGCCGCTGCATACGCCG GGAATTGTGGTGTATCAGCACGGACCGTTCGCCTGGGGGAAAGATGCCCACGACGCGGTGCATAACGCGGTAGTGATGGA AGAAGTGGCGAAAATGGCGTGGATTGCGCGCAGTATTAATCCACAACTCAATCACATCGACAGCTTCCTGATGAATAAAC ACTTCATGCGTAAGCACGGCCCCAACGCTTATTACGGGCAGAAGTAG Protein sequence : MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKADDMVVVDMSGKVVEGEYRPSSDTATHLE LYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGNAEPLHTP GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRKHGPNAYYGQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 2e-63 | 55 |
