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Name : orf4 (ECSP_4700) Accession : YP_003080497.1 Strain : Escherichia coli TW14359 Genome accession: NC_013008 Putative virulence/resistance : Virulence Product : LEE-encoded type III secretion system factor Function : - COG functional category : - COG ID : - EC number : - Position : 4677775 - 4678374 bp Length : 600 bp Strand : - Note : - DNA sequence : ATGACAATTTTTAATAAAATAGACTATAACTATTATAAATTAATTAATTATCCAATCATGATGGTTCATGATGAATGGCT AGGTGATTTAACCGGTGTCAATCAGGTCAGTTTTCGGCGTTTAAGAGAAACTAGTTCTACTCGTAATCAACTCAATAAGA TATTGCGTCAGGAAATACATGATAAAATTTCTGGTGTGGAATTATCTGACATAAATAAGGAAGGTTTTTTATATCAGTCA ATTGGGAAAATAAGATTGCTTGCTCTAAGTAGTGCATTATTTGACATTCAATGCCCTGATTATATTTTCTCACGATTATA TCGAGAAACTCTGATTAGAGAGATAGGATATCAAAATGTGAAGCAGTTATCATTCTATTGGCAGGGAGGGCAATGTAAAC CAGAATATGGTGAAGAACGGTTTTGTGCTGAGTTAATAAAATACGGTGCAGGAAATTTGGAGTGGCTATTTGCTGATAAT CCTTTATGGACCATAGTCAAATATCTTTTGCCGAAAAGTGGAGAAATAAAACCAACTCATATTAATGATTTATTTCTTAA CAGACTTAATAAAATTTTATTGCCTTATGAAACTTTATGA Protein sequence : MTIFNKIDYNYYKLINYPIMMVHDEWLGDLTGVNQVSFRRLRETSSTRNQLNKILRQEIHDKISGVELSDINKEGFLYQS IGKIRLLALSSALFDIQCPDYIFSRLYRETLIREIGYQNVKQLSFYWQGGQCKPEYGEERFCAELIKYGAGNLEWLFADN PLWTIVKYLLPKSGEIKPTHINDLFLNRLNKILLPYETL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z5137 | NP_290285.1 | hypothetical protein | Not tested | LEE | Protein | 2e-90 | 100 |
| ECs4585 | NP_312612.1 | hypothetical protein | Not tested | LEE | Protein | 2e-90 | 100 |
| unnamed | AAC31530.1 | L0051 | Not tested | LEE | Protein | 1e-90 | 100 |
| unnamed | ACU09475.1 | conserved hypothetical protein | Not tested | LEE | Protein | 1e-90 | 100 |
| ECO111_3769 | YP_003236105.1 | T3SS component | Virulence | LEE | Protein | 4e-90 | 99 |
| unnamed | AAC38367.1 | Orf4 | Not tested | LEE | Protein | 3e-90 | 99 |
| unnamed | AAK26698.1 | unknown | Not tested | LEE | Protein | 6e-89 | 97 |
| ECO103_3635 | YP_003223492.1 | T3SS component | Virulence | LEE | Protein | 9e-89 | 97 |
| unnamed | AAL57525.1 | unknown | Not tested | LEE | Protein | 6e-89 | 97 |
| ECO26_5254 | YP_003232136.1 | T3SS component | Virulence | LEE | Protein | 9e-89 | 97 |
| unnamed | AAL57586.1 | unknown | Not tested | LEE | Protein | 6e-89 | 97 |
| st07 | CAC81845.1 | ST07 protein | Not tested | LEE II | Protein | 6e-89 | 97 |
| unnamed | CAI43891.1 | hypothetical protein | Not tested | LEE | Protein | 6e-89 | 97 |
| unnamed | AAL06352.1 | unknown | Not tested | LEE | Protein | 9e-84 | 86 |
| SESS1635_03846 | AFO66398.1 | hypothetical protein; possible LEE-encoded type III secretion system factor | Not tested | SESS LEE | Protein | 1e-54 | 52 |
| SESS1296_03631 | AFO66318.1 | hypothetical protein; possible LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 6e-54 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| orf4 | YP_003080497.1 | LEE-encoded type III secretion system factor | VFG0829 | Protein | 5e-91 | 100 |
| orf4 | YP_003080497.1 | LEE-encoded type III secretion system factor | VFG0713 | Protein | 1e-90 | 99 |
