Gene Information

Name : escL (ECSP_4699)
Accession : YP_003080496.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Virulence
Product : LEE-encoded type III secretion system factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4677135 - 4677749 bp
Length : 615 bp
Strand : -
Note : -

DNA sequence :
GTGCTTACAGAAGATATCATACCAGAGGATAAGTTACAGGAAATTATTCAATCTGATGATATTATCAAACTGGCTCGAAA
AAAAACATATGAACATTTACTGAGGGCGAGGAGGAAATCGAAAGAATTAAAGACAGAATCCAGAAAAAAAATTGCCAGAA
AAATGATTCTAATGAGAGAAAGGATTCGAAAAAATAATAAAATAAAATTAGATAAAGAGGTTAACCAATCGATAAAATGG
GTTAAAGATATCCAGGCTATCGAGTTGGTCTTAATGCAGGACATAATGAATAAGATTCATTTGTCACTGACTAATGCATT
ACATTCTTTAGATACATCATCAAGAATTAATTGGGATGATTTACTTAATGAAGTTGTAAGGGAAACTCTATCTAATAACA
ATATTGTCGGAGCTATTAAGATCACTAAAAACCCAGACATTAAACTTGATCCTGGCGAGGCCAACAATATACAGCTTATT
AATGATGCAAACACACCGCATAATAAAATTATAATAGAAAATGAATATATTAGAATAACTTTAGACCCATTAGAGCAAAT
AAGTATTTTATTGAATTCATTTAAAGATAATTATCTTAGCATTATTCAGGAATGA

Protein sequence :
MLTEDIIPEDKLQEIIQSDDIIKLARKKTYEHLLRARRKSKELKTESRKKIARKMILMRERIRKNNKIKLDKEVNQSIKW
VKDIQAIELVLMQDIMNKIHLSLTNALHSLDTSSRINWDDLLNEVVRETLSNNNIVGAIKITKNPDIKLDPGEANNIQLI
NDANTPHNKIIIENEYIRITLDPLEQISILLNSFKDNYLSIIQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z5136 NP_290284.1 hypothetical protein Not tested LEE Protein 2e-88 100
unnamed ACU09474.1 conserved hypothetical protein Not tested LEE Protein 2e-87 99
unnamed AAC38368.1 Orf5 Not tested LEE Protein 7e-86 99
unnamed AAC31529.1 L0050 Not tested LEE Protein 4e-87 99
ECO111_3768 YP_003236104.1 T3SS component Virulence LEE Protein 1e-86 99
ECs4584 NP_312611.1 hypothetical protein Not tested LEE Protein 6e-87 99
unnamed CAI43890.1 hypothetical protein Not tested LEE Protein 3e-79 91
unnamed AAK26699.1 unknown Not tested LEE Protein 3e-79 91
unnamed AAL57526.1 unknown Not tested LEE Protein 3e-79 91
ECO26_5255 YP_003232137.1 T3SS component Virulence LEE Protein 8e-79 91
unnamed AAL57587.1 unknown Not tested LEE Protein 3e-79 91
st08 CAC81846.1 ST08 protein Not tested LEE II Protein 3e-79 91
ECO103_3634 YP_003223491.1 T3SS component Virulence LEE Protein 1e-78 90
unnamed AAL06353.1 unknown Not tested LEE Protein 8e-72 76
escL AFO66316.1 putative LEE-encoded putative type III secretion system factor Virulence SESS LEE Protein 5e-41 44
escL AFO66399.1 putative LEE-encoded putative type III secretion system factor Not tested SESS LEE Protein 2e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
escL YP_003080496.1 LEE-encoded type III secretion system factor VFG0828 Protein 7e-89 100
escL YP_003080496.1 LEE-encoded type III secretion system factor VFG0714 Protein 3e-86 99