Gene Information

Name : xylA (ECSP_4561)
Accession : YP_003080359.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 4534759 - 4536081 bp
Length : 1323 bp
Strand : -
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGCAAGCCTATTTTGACCAGCTCGATCGCGTTCGTTATGAAGGCTCAAAATCCTCAAACCCGTTAGCATTCCGTCACTA
CAATCCCGACGAACTGGTGTTGGGCAAGCGTATGGAAGAGCACTTGCGATTTGCCGCCTGCTACTGGCACACCTTCTGCT
GGAACGGGGCGGATATGTTTGGTGTGGGGGCGTTTAATCGTCCGTGGCAGCAGCCTGGTGAGGCACTGGCGTTGGCGAAG
CGTAAAGCAGATGTCGCATTTGAGTTTTTCCACAAGTTACATGTGCCATTTTATTGCTTCCACGATGTGGATGTTTCTCC
TGAGGGCGCGTCGTTAAAAGAGTACATCAATAATTTTGCGCAAATGGTTGATGTTCTGGCAGGCAAGCAAGAAGAGAGCG
GCGTGAAGCTGCTGTGGGGAACCGCTAACTGCTTTACAAACCCTCGCTATGGCGCGGGTGCGGCGACGAACCCAGATCCA
GAAGTCTTCAGCTGGGCGGCAACGCAAGTTGTTACAGCGATGGAAGCAACCCATAAATTGGGTGGTGAAAACTATGTCCT
GTGGGGCGGTCGTGAAGGTTACGAAACGCTGTTAAATACCGATTTGCGTCAGGAGCGTGAACAACTGGGCCGCTTTATGC
AAATGGTGGTTGAGCATAAACATAAAATCGGCTTCCAGGGCACGTTGCTTATCGAACCGAAACCGCAAGAACCGACTAAA
CATCAATATGATTACGATGCTGCGACAGTCTATGGCTTCCTGAAACAGTTTGGTCTGGAAAAAGAGATTAAACTGAACAT
TGAAGCTAACCACGCGACGCTGGCAGGTCACTCTTTCCATCATGAAATAGCCACCGCCATTGCGCTTGGCCTGTTCGGTT
CTGTCGACGCCAACCGTGGCGATGCGCAACTGGGCTGGGACACCGACCAGTTCCCGAACAGTGTGGAAGAGAATGCGCTG
GTGATGTATGAAATTCTCAAAGCAGGCGGTTTCACCACCGGTGGTCTGAACTTCGATGCCAAAGTACGTCGTCAAAGTAC
TGATAAATATGATCTGTTTTACGGTCATATCGGCGCGATGGATACGATGGCACTGGCGCTGAAAATTGCAGCGTGCATGA
TTGAAGATGGCGAGCTGGATAAACGCATCGCGCAGCGTTATTCCGGCTGGAATAGCGAATTGGGCCAGCAAATCCTGAAA
GGCCAAATGTCACTGGCAGATTTAGCCAAATATGCTCAGGAACATAATTTGTCTCCGGTGCATCAGAGTGGTCGCCAGGA
GCAACTGGAAAATCTGGTAAATCATTATCTGTTCGACAAATAA

Protein sequence :
MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAK
RKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMVDVLAGKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK
HQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENAL
VMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAACMIEDGELDKRIAQRYSGWNSELGQQILK
GQMSLADLAKYAQEHNLSPVHQSGRQEQLENLVNHYLFDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 2e-105 48
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 1e-105 48