Gene Information

Name : ECSP_3944 (ECSP_3944)
Accession : YP_003079761.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 3914650 - 3915852 bp
Length : 1203 bp
Strand : +
Note : -

DNA sequence :
ATGAACAACACACTCCCCGACAACATCGAGCAACTGAAGGCCCTGCTGATCGCACAGCAGGCTGTTATCGTCCGTCTGTC
TGGTGAAATAACCGGCTATGCCCGCGAGATCAGCTCACTCAGAGCGCTGGTCGCTAAACTGCAGAGAATGTTGTTCGGTC
GCAGCAGCGAGAAAAGCCGCGAGAAGATAGAAAAGAAGATCGCACGGGCAGAAACGCGTATAACCGAGCTCCAGAACAGG
CTTGGTGAGGCGCAGTTGCAACTCACCTCAATGGCCGGAGAGACAGCGCCGAAAACATCAGACTCTCCCGTCCGCAAAGC
ACTTCCGGCAACACTTCCCCGTGACAGGCAGGTTATCTCCCCGGCAGAAACCGAATGCCCCGTCTGCAGCGGTAAACTGA
AACCGCTGGGAGAAAGCATCTCTGAACAACTGGATATCATCAACACCGCGTTCAGGGTAATCGAAACGGTTCGCCCAAAA
CGGGCCTGCAGCCGGTGCGACTGTATAGTTCAGGCTCCGCAGCCACCAAAACCCATCGAGCGCAGTTACGCCAGTCCGGC
TCTGCTGGCCCGCATAATCATGGCTAAGTTCGCCGAGCATCTGCCGCTGTACCGTCAGTCGGAAATCTATGCCCGCCAGG
GCGTGGAGCTGCACCGCAATACGATGGGGCGCTGGGTTGACATCATGGGAGAGCAGCTTCGCCCGCTGTATGATGAACTG
AAGCACTATGTGCTGATGCCGGGTAAAGTGCATGCCGATGACACGCCGGTAAATGTACTGGAGCCGGGTCAGGGTAAAAC
CCGTACCGGACGGCTGTGGGTCTATGTTCGTGACGATCGCAACGCCGGTTCGACCATGCCGGCAGCGGTGTGGTTCTCAT
ACTCTCCCGACCGCAAAGGCATCCACCCACAGCAACATCTGGCGGACTACAGAGGTATCCTGCAGGCCGATGCATATGCG
GGTTACAATGCTCTTTACGAAAGCGGTCAGGCAACCGAAGCGGCTTGTATGGCACATGCCCGACGCAAGATCCACGATGT
ACATGTCCGCCATCCAACGACAGTAACGGGAGAAGCGCTCCGTCGTATCGGGGAACTGTACGCTATCGAGGCTGAGATCC
GCGGCAGTCCGGCAGAAGAGCGACTGGCGGTCAGAAAAGCCAGAACGGTACCGCTAATGCAGTCGTTGTATGAGTGGCTC
TAG

Protein sequence :
MNNTLPDNIEQLKALLIAQQAVIVRLSGEITGYAREISSLRALVAKLQRMLFGRSSEKSREKIEKKIARAETRITELQNR
LGEAQLQLTSMAGETAPKTSDSPVRKALPATLPRDRQVISPAETECPVCSGKLKPLGESISEQLDIINTAFRVIETVRPK
RACSRCDCIVQAPQPPKPIERSYASPALLARIIMAKFAEHLPLYRQSEIYARQGVELHRNTMGRWVDIMGEQLRPLYDEL
KHYVLMPGKVHADDTPVNVLEPGQGKTRTGRLWVYVRDDRNAGSTMPAAVWFSYSPDRKGIHPQQHLADYRGILQADAYA
GYNALYESGQATEAACMAHARRKIHDVHVRHPTTVTGEALRRIGELYAIEAEIRGSPAEERLAVRKARTVPLMQSLYEWL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 0.0 100
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 0.0 99
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-103 67
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-118 63
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-92 57
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 2e-98 54
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-98 54
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-98 54
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-98 54
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-98 54
unnamed AAC31494.1 L0015 Not tested LEE Protein 1e-98 54
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-97 54
tnp AEA34686.1 transposase Not tested Not named Protein 9e-99 54
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-97 54
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-97 54
unnamed AAL57570.1 unknown Not tested LEE Protein 7e-98 54
unnamed AAL08460.1 unknown Not tested SRL Protein 5e-97 53
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 2e-85 52
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 1e-98 51
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 1e-88 51
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 1e-88 51
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 8e-78 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSP_3944 YP_003079761.1 hypothetical protein VFG1513 Protein 8e-104 67
ECSP_3944 YP_003079761.1 hypothetical protein VFG0793 Protein 6e-99 54
ECSP_3944 YP_003079761.1 hypothetical protein VFG1051 Protein 3e-97 53
ECSP_3944 YP_003079761.1 hypothetical protein VFG1516 Protein 1e-85 52
ECSP_3944 YP_003079761.1 hypothetical protein VFG1736 Protein 1e-85 52