Gene Information

Name : ECSP_2497 (ECSP_2497)
Accession : YP_003078384.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2508874 - 2509563 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence :
ATGCCGCTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGGTATGCAGTGAACTGCATATTGCCCCGTCAACGTA
TTACCACTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAGAGAGA
TACAGCGCGTATACGATGAAAATCATCAGGTGTACGGTGTGCGTAAAGTCTGGCGCCAGTTGTTACGCGAAGGTATCAGG
GTGGCCAGATGTACAGTGGCGCGCCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACTAC
CGTCAGCCGGAAAGCCGTTTCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGTCCTGACCAGCTGTGGGTGG
CTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTTCCGGATGTATCGTG
GGGTGGCGAGTCTCATCGTCTATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTGTGGGCCCGTCGGCCGTC
CGGCACAGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCACTGGCCTATACGGAGCGACTAAAAGAAGCAAAACTGC
TGGCATCAACAGGGAGTACAGGTGACTCGTATGACAATGTATTTTATTAG

Protein sequence :
MPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIR
VARCTVARLMAVMGLAGVLRGKKVRTTVSRKAVSAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFSGCIV
GWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTERLKEAKLLASTGSTGDSYDNVFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1198 NP_286733.1 transposase Not tested TAI Protein 4e-103 98
Z1638 NP_287141.1 transposase Not tested TAI Protein 4e-103 98
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-103 98
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-103 98
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-99 97
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-102 97
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-102 97
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-102 97
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-101 96
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 3e-101 96
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 4e-101 96
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-101 96
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 8e-76 96
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-97 95
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 7e-98 95
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 4e-98 95
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 4e-98 95
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 4e-98 95
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-99 94
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 3e-32 49
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 6e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSP_2497 YP_003078384.1 transposase VFG1602 Protein 2e-99 94