Gene Information

Name : ECSP_1772 (ECSP_1772)
Accession : YP_003077679.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Unknown
Product : IS1 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 1779529 - 1779924 bp
Length : 396 bp
Strand : +
Note : -

DNA sequence : 
GTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTA
TGACAGGATACGGAGGACGGTTGTGGCGCACGTCCTCGGTGAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGC
TGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTT
ATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACACCTGGCAAGGCCGGGACGGAAGTC
ACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGACATCGGGCATTATCTGAACATAAAACACTATCAGTAA

Protein sequence : 
MIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVLGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHV
ISKRYTQRIERHNLNLRQHLARPGRKSLSFSKSVELHDKDIGHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 6e-47 97
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 2e-47 97
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 2e-47 97
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-46 96
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-46 96
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 4e-47 96
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-46 94
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 6e-47 91
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 6e-47 91
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 6e-47 91
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 3e-44 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSP_1772 YP_003077679.1 IS1 transposase VFG0612 Protein 6e-47 94